Vulpes lagopus (Arctic fox): 121472529
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Entry
121472529 CDS
T07435
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter isoform X1
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04721
Synaptic vesicle cycle
vlg04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
121472529 (SLC6A4)
04721 Synaptic vesicle cycle
121472529 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vlg02000
]
121472529 (SLC6A4)
Transporters [BR:
vlg02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
121472529 (SLC6A4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
121472529
NCBI-ProteinID:
XP_041579644
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Position
12:17208065..17232417
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AA seq
630 aa
AA seq
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METTALNSQKELSACKDKEDCQENGVLQQGVPVPEDKVEAGQISSGYSAVPSPGAGDDPQ
HSIPAATTALVAEVHQGEREAWGKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIM
AWALYYLISSFTDQLPWTSCKNSWNTGNCTNYFSGDNITWTPHSTSPAEEFYMRHVLQLH
RSNGLQDLGGISWQLTLCIMLIFAVIYFSIWKGVKTSGKVVWVTATFPYIILSVLLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWSKRREWFVLCVVITCFFGSLVT
LTFGGAYVVKLLEEYATGPAVLTVALIEAVAVYWFYGITQFCSDVKEMLGFSPGWFWRIC
WVAISPLFLLFIICSFLMSPPQLRLFQYNYPQWSIILGYCIGTSSFICIPTYITYRLVTT
PGTFKERIIRGITPETATEIPYGDIHLNAI
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccacagccttaaattcccagaaggagctatcagcatgtaaagataaagaagac
tgtcaggaaaatggagttctacagcagggtgtccctgtccccgaggataaggtggaggct
ggccaaatctccagtgggtactcagcagttccaagccctggtgcaggagacgaccctcag
cactccattccggctgccaccacagccctagtggccgaagttcatcaaggggaacgagag
gcctggggcaagaagatggatttcctcctgtcggtcattggctacgctgtggacctgggc
aacgtctggcgcttcccctacatatgttaccagaatggagggggggcattcctcctcccc
tacactatcatggccatttttggggggatcccgctgttctacatggagctcgcgctgggc
cagtaccaccgaaatggatgcatttcaatatggaggaaaatctgcccgattttcaaaggg
atcggttatgccatctgcatcattgccttctacattgcctcctactacaacaccatcatg
gcctgggcactctactacctcatttcgtccttcacggaccagctgccctggaccagctgc
aagaactcctggaacactggcaactgcaccaactacttctccggggacaacatcacctgg
acgccccactcaacgtcccctgcagaagaattttacatgcgccacgtcctgcagctccat
cggtctaatggacttcaggacctgggcggcatcagctggcagctcaccctctgcatcatg
ctgatcttcgctgttatctacttcagtatctggaaaggtgtcaaaacatctggcaaggtg
gtatgggtgacagccaccttcccttatatcatcctttctgtcctgctggtaaggggggcc
accctccccggagcctggaggggtgttctcttctacttgaaacccaactggcagaaactc
ctggagacaggggtgtgggtggatgctgctgctcagatcttcttctctcttggtcctggc
tttggggttttactggcttttgctagctacaacaaattcaacaacaattgttaccaagac
gccctggtgaccagtgtggtgaactgtatgacgagcttcgtgtcaggatttgtcatcttc
acagtgctcggatatatggctgagatgaggaacgaagatgtgtctgaggtggccaaagat
gcaggccccagcctcctcttcatcacatatgcagaagccatagccaacatgccagcatcc
acattctttgctatcatcttcttcctgatgttgatcacactgggcctggacagcactttt
gcaggcttggagggggtgatcacagctgtgctagatgagtttccacacatctggtccaag
cgccgggagtggtttgtgctttgtgtggtcattacctgcttctttggatccctggtcacc
ctgacctttggcggggcatacgtggtgaaactgctggaggagtatgccacagggcccgca
gtgctcaccgttgcacttatagaggcagttgccgtgtattggttttatggcatcactcag
ttctgcagtgacgtgaaggaaatgcttggcttcagccctggatggttctggaggatctgc
tgggtagccatcagccctctgtttctcctgttcatcatttgtagttttttgatgagtccg
ccacagctacgacttttccaatataattatccgcagtggagtatcatcctgggttactgc
ataggaacctcatctttcatctgcatccccacatatataacttatcggctggtcaccact
ccagggacatttaaagagcgtattattagaggcattactccagaaactgcgacagaaatt
ccctatggggacatccatttgaatgccatataa
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