Vulpes lagopus (Arctic fox): 121472747
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Entry
121472747 CDS
T07435
Symbol
GRIN2C
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C isoform X1
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg04020
Calcium signaling pathway
vlg04024
cAMP signaling pathway
vlg04080
Neuroactive ligand-receptor interaction
vlg04713
Circadian entrainment
vlg04720
Long-term potentiation
vlg04724
Glutamatergic synapse
vlg05010
Alzheimer disease
vlg05014
Amyotrophic lateral sclerosis
vlg05017
Spinocerebellar ataxia
vlg05020
Prion disease
vlg05022
Pathways of neurodegeneration - multiple diseases
vlg05030
Cocaine addiction
vlg05031
Amphetamine addiction
vlg05033
Nicotine addiction
vlg05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121472747 (GRIN2C)
04024 cAMP signaling pathway
121472747 (GRIN2C)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121472747 (GRIN2C)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
121472747 (GRIN2C)
04720 Long-term potentiation
121472747 (GRIN2C)
09159 Environmental adaptation
04713 Circadian entrainment
121472747 (GRIN2C)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
121472747 (GRIN2C)
05014 Amyotrophic lateral sclerosis
121472747 (GRIN2C)
05017 Spinocerebellar ataxia
121472747 (GRIN2C)
05020 Prion disease
121472747 (GRIN2C)
05022 Pathways of neurodegeneration - multiple diseases
121472747 (GRIN2C)
09165 Substance dependence
05030 Cocaine addiction
121472747 (GRIN2C)
05031 Amphetamine addiction
121472747 (GRIN2C)
05033 Nicotine addiction
121472747 (GRIN2C)
05034 Alcoholism
121472747 (GRIN2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
vlg04040
]
121472747 (GRIN2C)
Ion channels [BR:
vlg04040
]
Ligand-gated channels
Glutamate (ionotropic)
121472747 (GRIN2C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
121472747
NCBI-ProteinID:
XP_041580032
LinkDB
All DBs
Position
12:complement(54632737..54650858)
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AA seq
1264 aa
AA seq
DB search
MFPLFFPSGCVSLTPAFTSCPRAHPFSLCFCLPIRISLQDPPVDMGGALGPALLLTSLLG
AWAGLGPGQGEQAVTVAVVFGSSGPPQAQARTRLTSQSFMDLPLEIQPLTVGVNNTNPSS
LLTQICGLLGAARVHGIVFEDNVGTEAVAQILDFISSQTHVPILSISGGSAVVLTPKEPG
SAFLQLGVSLEQQLQVLFKVLEEYDWSAFAVITSLHPGHALFLEGVRAAADASYLSWRLL
DVLTLELGPGGQRAHTQRLLRQLDAPVLVAYCSREEAEVLFAEAAQAGLVGPGHVWLVPS
LALGSTDAPPAAFPVGLISVVTESWRLSLRQKVRDGVAILALGAHGYQRQHGALPSPAGD
CRGHPGPVSPAREAFYRHLLNVTWEGRDFSFSPGGYLVQPTMVVIALNRHRLWEMVGRWD
HGVLHMKYPVWPRYSASLQPVVDSRHLTVATLEERPFVIVESPDPGTGGCVPNTVPCRRQ
SNHTFSGDTAPYTKLCCKGFCIDILKKLAKVVKFSYDLYLVTNGKHGKRVRGVWNGMIGE
VYYQRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPSVWV
MMFVMCLTVVAITVFMFEYFSPVSYNQNLTSGKKSGGPSFTIGKSVWLLWALVFNNSVPI
ENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVSGLSDKKFQRPQDQYPP
FRFGTVPNGSTERNIRSNYRDMHTHMVKFNQRSVEDALTSLKMGKLDAFIYDAAVLNYMA
GKDEGCKLVTIGSGKVFATTGYGIAMQKDSHWKRAIDLALLQFLGDGETQKLETVWLSGI
CQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLALLVFAWEHLVYWKLRHSVPNTSRLDFLL
AFSRGIYSCFSGVQSLASPARPPSPDLTAGSAQASVLKMLQAARDMVTTAGVSSSLDRAA
RTIEGWGSGRRAPPPPACPGPRPPSPRPSPEPSPTGWGPPGGGRAAPGARAPPPAGRPPT
PRPSLPDVSRVSGPAAREARRQVRAGRGGRHLAASERRALPERPLSPERCHYSSFPRAAR
SGRPFLPLFPEPPEPEDLPLLGPEQLARREALLRAAWARGLRPRHASLPSSVAEAFARPR
SLPAGCGRPACGHWAPAPSYREACRAGVWARVPAWHRQHACLHAHAHLPLCWGAVCPPLP
PCASHGPWLPGAWGPPGRRGRTLGLSTGYRDSAGLEEVSRAACGTHSFPGPCTWRRISSL
ESEV
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgttccctcttttctttccctcgggatgtgtgtctctgacgccggccttcacctcctgt
ccacgtgctcatcctttctctttgtgcttctgtctccctatccggatctctctgcaggac
cctccggtggacatgggtggcgccctggggccggccctgctgctcacctcactcctcggt
gcctgggcggggctgggcccggggcagggtgagcaggctgtgaccgtggccgtggtgttt
ggcagctcggggccgccgcaggcccaggcgcgcacccgcctcacctcccagagcttcatg
gacctgcctctggagatccagccgctcaccgtgggagtcaacaacaccaaccccagcagc
ctcctcactcagatctgcggactcctgggtgcggcccgtgtccacggcattgtctttgag
gacaacgtgggtaccgaggcggtggcccagatcctggacttcatttcctcccagacccac
gtgcccatcctcagcatcagtgggggctctgctgtggtcctcacccccaaggagccgggc
tccgccttcctgcagctgggcgtgtccctggagcagcagctgcaggtgctgttcaaggtg
ctggaggagtacgactggagcgcgttcgccgtcatcaccagcctgcaccccgggcacgcg
ctcttcctggagggggtgcgcgccgcggccgacgccagctacctgagctggcggctgctg
gacgtgctcaccctggagctgggccccggcgggcagcgggcacacacgcagcgcctgctg
cgccagctggacgccccggtgctggtggcctactgctcgcgcgaggaggccgaggtgctc
ttcgcagaggcggcgcaggccgggctggtggggcccggacacgtgtggctggtgcccagc
ctggcgctgggcagcaccgacgcgccccccgccgccttccccgtgggcctcatcagcgtc
gtcaccgagagctggcgcctcagcctccgccagaaggtccgcgacggcgtggccatcctg
gccctgggcgcccacggctaccagcggcagcacggcgccctgccctccccggccggggac
tgccgtggccacccggggcccgtcagccctgcccgggaggccttctacaggcacctactg
aatgtcacctgggagggccgagacttctccttcagccctggtgggtacctggtccagccc
accatggttgtgatcgccctcaaccgccaccgcctctgggagatggtggggcgctgggat
cacggcgtcctgcacatgaagtacccggtgtggcctcgctatagtgcgtctctgcagcct
gtggtggacagccggcacctgacggtggccacgctggaagagcggccctttgtcattgtg
gagagcccggaccctggcacgggtggctgtgtacccaacactgtgccgtgccgcaggcag
agcaaccacaccttcagtggtgacacggccccctacaccaagctgtgctgtaagggcttc
tgcattgacattctcaagaagctggccaaggtggtcaagttctcctatgacctgtacctg
gtgaccaatggcaagcatggcaagagggttcgaggcgtgtggaatggcatgattggggag
gtgtactaccagcgggcagacatggccatcggctccctcaccatcaacgaggagcgctcc
gagatcgtggacttctctgtgcccttcgtggagacgggcatcagcgtgatggtggcgcgc
agcaacggcaccgtgtctccatcagccttcctggagccctatagcccttcggtgtgggtg
atgatgtttgtcatgtgtctcactgtggtggccatcacggtcttcatgtttgagtacttc
agccctgtcagctacaaccagaacctcaccagtggcaagaagtctgggggcccatccttc
accatcggcaagtctgtgtggctgctgtgggcgctggtcttcaacaactcggtgcccatc
gagaacccccgaggcaccaccagcaagatcatggtcctggtgtgggccttctttgccgtc
atcttcctcgccagctacaccgccaacctggccgccttcatgatccaggagcagtacatc
gacaccgtgtctggccttagtgataagaagtttcagcggcctcaggatcagtacccaccc
ttccgctttggcacggtgcccaacggcagcacggagcgcaacatccgcagcaactaccga
gacatgcacacccacatggtcaagttcaaccagcgttcggtggaagacgcgctcaccagc
ctcaagatggggaagctggacgccttcatctatgatgctgccgtcctcaactacatggcg
ggcaaggacgagggctgcaagctggtcaccattggctctggcaaggtctttgccaccact
ggctacggcatcgccatgcagaaggactcccattggaagcgggccatagacctggcgctt
ctgcagttcctgggggatggggagacgcagaagctggagactgtgtggctctcggggatc
tgccagaatgagaagaacgaggtgatgagcagcaagctggacatcgacaacatggctggt
gtcttctacatgctgcttgtggccatggggctggccctgctggtcttcgcctgggagcac
ctggtctactggaaactgcgtcactcggtgcccaacacgtcccggctggacttcctgctg
gccttcagcaggggcatctacagctgcttcagcggggtgcagagcctggccagccccgcg
cggccgcccagccccgacctgaccgccggctcggcccaggccagcgtgctcaagatgctg
caggcggcgcgcgacatggtgaccacggcgggcgtgagcagctccctggaccgcgcggcg
cgcaccattgagggctggggcagcggccgccgcgcgcccccaccgcccgcctgccccggc
ccgcggccgcccagcccccgcccgtcccccgagcccagccccaccggctgggggccgccc
ggcgggggccgcgccgcgccgggggcccgggccccgccgcccgcgggccgccccccgacg
ccgcggccgtcgctgcccgacgtctcccgggtatcgggccccgcggcccgcgaggcgcgg
cggcaggtgcgcgcggggcgcggcgggcggcacctggcggcctccgagcggcgcgcgctc
ccagagcgccccctgtcgcccgagcgctgccactacagctccttccctcgggccgcccgg
tcggggcgccccttcctcccgctcttccccgagcccccggagccggaggacctgccgctg
ctcgggccggagcagctggcgcggcgggaggccctgctgcgcgccgcctgggcccggggc
ctgcgcccgcgccacgcctccctgcccagctcggtggccgaggccttcgcccggccgcgg
tcgctgcccgcggggtgtggccgcccggcctgcgggcactgggcgccggcgccgtcctac
cgggaggcctgcagggccggcgtgtgggccagggtccccgcctggcacagacagcacgcc
tgcctgcacgcccacgcccacctgccgctttgctggggggctgtgtgcccccccctgccc
ccctgtgccagccacggcccctggctccctggggcctgggggcctccggggcgcaggggc
aggaccctggggctgagcacaggctacagggacagtgcggggctggaagaggtcagcagg
gcggcctgcgggacacacagcttccccggaccctgtacgtggaggcggatctccagcctg
gagtcagaagtgtga
DBGET
integrated database retrieval system
