Vulpes lagopus (Arctic fox): 121501317
Help
Entry
121501317 CDS
T07435
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
vlg
Vulpes lagopus (Arctic fox)
Pathway
vlg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vlg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121501317 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vlg03019
]
121501317 (CLP1)
Enzymes [BR:
vlg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
121501317 (CLP1)
Messenger RNA biogenesis [BR:
vlg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
121501317 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
ATP_bind_1
MMR_HSR1
AAA_18
TniB
AAA_16
AAA_22
nSTAND3
CbiA
Motif
Other DBs
NCBI-GeneID:
121501317
NCBI-ProteinID:
XP_041629198
LinkDB
All DBs
Position
11:complement(62712108..62715483)
Genome browser
AA seq
425 aa
AA seq
DB search
MGEEANDDKKPTTKFELERETELRFEVEASQSVQLELLAGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHGCSLQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDER
IREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDLEHQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgggagaggaggccaatgacgacaagaagccaacaactaaatttgaactagagcgagaa
acagaacttcgctttgaggtggaggcatctcagtcagttcagttggagctgctggctggc
atggcagaaatatttggcacagagctgacccgaaacaagaaattcacctttgatgctggt
gccaaggtggctgttttcacttggcatggttgttctttacagctgagtggccgcaccgag
gtggcttatgtctccaaggacactcctatgttgctttatctcaacactcacacagccttg
gagcagatgaggaggcaggcggagaaggaagaagagcgaggtcctcgggtgatggtcgtg
ggccccactgatgtgggcaagtccacagtgtgccgtctgctgctcaactatgcagtgcgt
ttgggccgccgtcccacttatgtggagctggatgtgggccaggggtctgtttccatccct
ggtaccatgggggccctctacattgagcggccagcagatgttgaagagggattctctatc
caggcccctctggtgtatcattttggctccaccactcctggcaccaacatcaagctttat
aataagattacatctcgtttagcggatgtgttcaatcaaaggtgtgaagtgaaccgaagg
gcctctgtgagtggctgtgtcattaacacctgtggctgggtcaagggttctgggtaccag
gccctggtgcacgcagcctcagcctttgaggtagatgtggttgtggttctggatcaagaa
cgactgtacaatgaactaaaacgggacctgcctcacttcgtccgaactgtgctgctccct
aaatcagggggtgtggttgaacgctccaaagacttccgacgggagtgtagggatgagcgt
atccgtgagtatttctatggattccggggctgtttctatccccatgccttcaatgtcaaa
ttttcagatgtgaaaatctacaaagttggggcacccaccatcccagactcctgtttgcct
ttgggcatgtctcaggaggacaatcagctcaagctagtaccagtcacacctggacgagat
atggtgcaccaccttctgagtgttagcactgctgagggcacagaggagaacctttctgag
accagtgtggctggcttcattgtggtgaccagtgtggacctggaacatcaggtgtttact
gttctctctccagccccccgcccactgcctaagaacttccttctcatcatggatatccgg
ttcatggatcttaagtag
DBGET
integrated database retrieval system