Vibrio mimicus: AL543_13590
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Entry
AL543_13590 CDS
T04381
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
vmi
Vibrio mimicus
Pathway
vmi00730
Thiamine metabolism
vmi01100
Metabolic pathways
vmi01240
Biosynthesis of cofactors
vmi04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
vmi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
AL543_13590
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
AL543_13590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vmi03016
]
AL543_13590
Enzymes [BR:
vmi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
AL543_13590
Transfer RNA biogenesis [BR:
vmi03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
AL543_13590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
Transcrip_reg
FANCL_d2
Motif
Other DBs
NCBI-ProteinID:
AMG03949
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Position
2:1567171..1568622
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AA seq
483 aa
AA seq
DB search
MKFIVKPHPEIFVKSESVRKRFTKILESNIRIIVKARTQGVAVFNRRDHIEVTANSDTYY
AEVLEILTTTPGIQQILEVQQSTFTDLHNIYEQVLDLNRANIENKTFVVRAKRRGKHDFT
SIELERYVGGGLNQAVASAKVKLTNPDVTVQVEVVDELLNQVIARHKGLGGFPLGTQEDV
LSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQTAYYLWKKYGSSAKVRFI
AIDFEPVVAEILEKIDDGQMGVVLKRMFMRAAGMVAEKFGIQALVTGEALGQVSSQTLTN
LRHIDNVTDTLILRPLINWDKEDIIRLAREIGTEDFAKTMPEFCGVISKSPTVKAVKEKL
EEEEAKFDFSLLEQVVYNARQIDIREIGKESLEKAPEVELVNTAEESNAVVLDIRSPDEE
DESPLEIAGVEVKHLPFYKLATQFGDLDQSKTYLLYCSRGVMSRLQALYLQEQGFSNVKV
YRP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatcgtcaaaccccatccggaaatttttgtgaaaagtgaatcggtacgtaag
cgtttcacaaagatccttgaaagcaatattcgaattattgtgaaagcccgcacacaaggg
gtggcggtattcaatcgtcgcgatcatattgaagtgacggcaaacagcgacacgtactac
gccgaagtgctggaaattctgaccaccacaccgggtattcagcaaattttggaagtgcag
cagtcaacctttaccgatctgcacaacatctatgagcaagtgctggatctgaatcgcgcc
aatatcgaaaacaaaacgttcgtggtgcgtgcgaaacgtcgtggtaagcatgattttacc
tctatcgagctagagcgttatgttggtggtggcctcaatcaagccgtagcaagcgctaag
gtgaaattgaccaatcctgacgtgactgtgcaagtggaagtggttgatgaactgctgaac
caagtgattgcacgccataaaggtttgggcggtttccctctaggcacacaagaagatgtg
ttgagcctgatttctggtggcttcgactcaggcgtgtcgagctatctgcacatcaaacgt
ggctcaaaagtgcattactgcttcttcaatcttggtggtccagctcacgagattggcgtt
aagcaaaccgcttactacttgtggaaaaaatacgggtcatccgccaaagtacgtttcatc
gcgatcgatttcgagcctgttgtggctgaaattttagagaaaatcgatgatggccaaatg
ggcgttgtgctgaaacgtatgtttatgcgcgcagcaggtatggtggcagagaagtttggt
attcaggcgttagtgactggtgaagctctgggtcaggtgtctagccaaaccctgactaac
ttacgccatatcgacaatgtgactgacactttgattctgcgtccactgatcaactgggat
aaagaagatatcatccgtctggcacgtgaaatcggtactgaagatttcgcgaaaactatg
cctgagttctgtggtgtgatttcaaaaagtccaaccgtgaaagcagttaaagagaagctg
gaagaagaagaagccaaatttgatttttctctgcttgagcaagtggtgtacaacgcacgc
caaatcgacattcgtgagattggtaaagagtcactcgaaaaagcgcctgaagtagaacta
gtgaacacagccgaagagagcaacgctgttgtgttagatattcgcagtccagacgaagag
gatgaaagtccacttgagatcgcaggcgttgaagtgaagcatctgccgttctacaagcta
gcgacccagttcggtgatttggatcagtcgaaaacttacttgctgtactgctcacgtggt
gtgatgagccgcttacaagcgctctacctgcaagagcaaggttttagcaacgtgaaagtt
tatcgcccataa
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