Vitreoscilla massiliensis: LVJ82_15315
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Entry
LVJ82_15315 CDS
T08422
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
vms
Vitreoscilla massiliensis
Brite
KEGG Orthology (KO) [BR:
vms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vms03016
]
LVJ82_15315 (trmA)
Enzymes [BR:
vms01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
LVJ82_15315 (trmA)
Transfer RNA biogenesis [BR:
vms03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
LVJ82_15315 (trmA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
DREV
Methyltransf_11
Methyltransf_4
Methyltransf_12
Methyltransf_31
MTS
Motif
Other DBs
NCBI-ProteinID:
UOO88809
LinkDB
All DBs
Position
3059838..3060911
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AA seq
357 aa
AA seq
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MPNVLQQHADKLKQLIAPHYQGEVEQFASPSDAYRMRAEFRVWHQEGKPYYAVYTTDNPE
GKRQVQIIDSWPIVHESIAAIMPKLLAAVAGNTVLTHKWFQVEFLATLSGDMLITLVYHR
ALDAEWEAAARALAAELGVYIIGRSRKQKIVLSQDYVTEALNVAGRTYRYRQIEGGFTQP
NAWVCEKMLAWAVDAAGDNDRDLLELYCGNGNFTLPLSRCFRQVLATEISKTSVQAAEWS
IAENSCDNIKIARLSAEELTEAMNGVREFRRLQEAGINVAEYDISTVFVDPPRAGIDDDT
LKMLQGFERIIYISCNPLTLADNLNTLAQTHRITKAAVFDQFPHTHHVEAGVLLERV
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcccaacgtgttgcaacaacatgccgacaagctcaagcaattaatcgcgccccattat
caaggtgaagtggaacaatttgcatctccaagcgatgcctatcgcatgcgtgctgagttt
cgggtctggcatcaagagggcaaaccttattatgcggtttacaccaccgacaatcctgaa
ggcaaacgccaagttcaaatcatagacagttggccgattgtgcacgagtccatcgccgcc
atcatgccgaaattattggcggcagtagcgggcaataccgtgttgacgcacaaatggttt
caagtggaattcttggccactttaagcggcgacatgttgattaccttggtttaccaccgc
gctttggatgctgagtgggaagccgctgcgcgtgcattagcagccgaattgggcgtgtac
atcatcggtcgcagccgcaaacaaaaaatcgtgttaagccaagattatgtaaccgaagca
ttgaatgtggcaggccgcacctatcgctatcgccaaatcgaaggcggctttacccaaccg
aatgcgtgggtatgcgaaaaaatgctggcgtgggcggtagatgcggccggtgacaacgac
cgcgatttattggaattgtattgtggcaatggcaatttcaccttgcccttgtcgcgttgt
ttccgccaagtcttggccacagaaatctccaaaacttcggtacaggccgctgaatggagc
attgccgaaaacagctgtgacaatatcaaaatcgcgcgcttgtcggcggaagaattgacc
gaagccatgaatggtgtgcgcgaatttcgccgtttgcaagaagctggcattaatgtggcc
gaatacgatatttcgaccgtgtttgtcgatcctccacgcgccggcatagacgacgacacc
ttgaaaatgttgcaaggctttgagcgcatcatctacatctcgtgcaatcctttgacgctg
gccgacaatttaaacaccttagcgcaaacccaccgcatcaccaaagcggcggtgtttgat
caatttccacacacccaccatgttgaggcgggtgttttgcttgagcgcgtgtaa
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