Vibrio natriegens: PN96_05010
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Entry
PN96_05010 CDS
T04636
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
vna
Vibrio natriegens
Pathway
vna00250
Alanine, aspartate and glutamate metabolism
vna00310
Lysine degradation
vna00350
Tyrosine metabolism
vna00650
Butanoate metabolism
vna00760
Nicotinate and nicotinamide metabolism
vna01100
Metabolic pathways
vna01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vna00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
PN96_05010 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PN96_05010 (gabD)
00310 Lysine degradation
PN96_05010 (gabD)
00350 Tyrosine metabolism
PN96_05010 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
PN96_05010 (gabD)
Enzymes [BR:
vna01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
PN96_05010 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
PN96_05010 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
PN96_05010 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
ALR15368
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Position
1:1073972..1075399
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AA seq
475 aa
AA seq
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MEQIKNKSLLSFMVASEVQGTAVTNPATGEVLGYAPVTTETDILDGIERASVAQKEWAAL
PAKTRSGLLNRWYQLLLENKEDLGRLMTLEQGKPLAEAQGEVLYGASFIEWFAEEAKRTY
GETIPSPSADKRLVTIKQPIGVACAITPWNFPIAMITRKAGPALAAGCTFIVKPSEATPF
SAFAVAELAYQAGIPRDVLQVVLGESSRQIGAIFTSHPLIRKLSFTGSTQVGSVLMQQCA
GDVKRTSMELGGNAPFIVFDDADIDAAVTGAMASKFRNAGQTCVCANRFYVHSKVYDEFV
TKFDAAVQQLKVGNGLEEGVNIGPVISESAKQGIQALIDGAIEQGAKPVTELKELDGLFM
QPVVLKDVTHDMKIVSEEIFGPVAPVIRFDTDEQLIEMANDTIYGLASYFYSQNIHRVWK
IAEALEYGMVGINEGMISTEVAPFGGVKQSGIGREGAKQGIDEYMDVKYLCFGGN
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggaacagattaaaaacaaaagccttctttcgttcatggtggcgagtgaagtgcaaggt
acagcggtaaccaacccagccacgggcgaagtgcttggctacgcgccagtgacgactgaa
accgacattctggacggtattgaacgcgctagcgttgcacaaaaagaatgggcggcgctg
ccagcgaaaactcgctctggcttacttaatcgttggtaccaacttctgctagaaaataaa
gaagatcttggccgactgatgacactagagcaaggcaagccgttggcagaggctcaaggc
gaagtcctttacggtgcaagctttatcgaatggtttgcagaagaagcgaaacgtacttac
ggtgaaaccattccatcgccaagtgcagacaagcgtttggtgaccattaaacagccaatt
ggtgtagcgtgtgccatcacgccgtggaacttcccgattgcaatgatcacccgtaaagcg
ggtccggcattagcggcaggttgtacttttatcgtgaaaccgtcagaagccacgccattt
tctgcatttgcagtggctgaactcgcttatcaagcgggtattccaagagacgtacttcaa
gttgttcttggggaaagctctcgtcagattggcgcgattttcacgtcacacccactgatc
cgcaagctttcgtttaccggctccactcaagtcggcagtgtgctgatgcagcaatgtgcg
ggtgacgtaaaacgcacatctatggagctgggtggcaatgcaccattcatcgtatttgat
gatgcagatatcgatgccgcagtaactggtgcgatggcgtctaaattccgcaatgctggc
caaacatgtgtttgtgcgaaccgtttctacgtacacagcaaagtgtatgacgagtttgtc
actaagtttgatgccgccgttcagcagcttaaagttggcaatggcctggaagagggcgtg
aatatcggcccggtgatcagcgagtcagcgaagcagggcatccaggcgttaattgatggt
gctatcgagcaaggtgcgaagccagtcactgagcttaaagagcttgatggcttgttcatg
cagccagtggtgctaaaagacgtgactcacgacatgaagattgtctctgaagaaatcttc
ggccctgtcgcgccagtgattcgctttgatactgatgaacagcttatcgaaatggcgaac
gatacgatttacggcttagcatcgtacttctacagccagaacattcaccgtgtttggaag
atcgcagaagcgcttgaatacggcatggtgggtattaacgaaggcatgatctctactgaa
gtggctcctttcggtggcgttaaacagtccggcatcggacgtgaaggagcaaaacagggt
atcgatgaatacatggacgtgaaatatctctgctttggcggtaactaa
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