KEGG   Vibrio natriegens: PN96_10115
Entry
PN96_10115        CDS       T04636                                 
Symbol
ribD
Name
(GenBank) 5-amino-6-(5-phosphoribosylamino)uracil reductase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
vna  Vibrio natriegens
Pathway
vna00740  Riboflavin metabolism
vna01100  Metabolic pathways
vna01110  Biosynthesis of secondary metabolites
vna01240  Biosynthesis of cofactors
vna02024  Quorum sensing
Module
vna_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:vna00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    PN96_10115 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PN96_10115 (ribD)
Enzymes [BR:vna01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     PN96_10115 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     PN96_10115 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: ALR16303
LinkDB
Position
1:complement(2196913..2198031)
AA seq 372 aa
MDQNTPQITFSPQDFSMMSRAIRLAKRGIYTTAPNPNVGCVIVRDGQIVGEGYHLRAGEP
HAEVHALRMAEGKAEGATAYVTLEPCSHHGRTPPCAEGLIKAKVARVVCAMQDPNPKVAG
RGIQMLRDAGIEVQVGLLESDALELNRGFIKFMQTGMPFIQLKMAASLDGQTALSNGQSQ
WITSPRARQDVQRYRAMSGGILSTSKTVIDDNASLNVRWDDLPQTIREQYQPEAVRQPVR
IILDRQCQLTDDLKLFNTDGERIIVSQDGDIAPQLNEDGQIDLATMLKAVATQHQVNHLW
VEAGATLASALIQANLVDELIVYLAPKLMGSDGRGLIGALGLTSMDHVIDLNITDARMVG
LDIRITATLIRK
NT seq 1119 nt   +upstreamnt  +downstreamnt
atggatcaaaacacgcctcaaattaccttctcccctcaagatttctcaatgatgtcgcgc
gccatcaggctcgctaagcgcggcatctataccacggctcctaatccaaatgttggttgc
gtcatcgttcgtgatggacagatagtcggagaaggttatcatctccgagctggagagcca
catgccgaagtccatgccttgcgaatggctgaaggtaaagccgaaggcgcgactgcctac
gttactctcgagccttgttctcaccatgggcgaacgcctccttgtgccgaagggctgatt
aaagcgaaggtggcgagagttgtttgcgcgatgcaagacccgaaccccaaagtcgcaggg
cgaggcattcaaatgcttcgcgatgcaggaatcgaggttcaggtaggattactggaaagc
gatgctctcgagttgaatcgaggattcatcaaatttatgcagacgggtatgcctttcatc
caattaaagatggcggccagtctcgatggtcaaaccgcactcagtaatggacagagccag
tggattacctccccacgggctcgtcaggatgttcagcgttatcgtgccatgagtggtggg
atattatcgaccagcaaaacggtgatcgacgataatgcctcattgaatgttcgctgggac
gatttgcctcaaacgatacgagagcagtatcaacctgaagctgtacgtcagccagtacgc
atcattttagatcgccaatgccagctgacagatgatctcaagttgtttaataccgatggt
gagcgcatcattgtcagtcaagacggtgatatcgcccctcaattgaatgaagatggccag
attgacctcgcgacgatgttgaaagccgttgccactcagcatcaagtcaatcatttatgg
gttgaagcgggagcgacgctcgcgagtgcactcatacaggctaatcttgtagatgaattg
atcgtttatcttgctccaaagttgatgggcagtgatggtcgcgggctgattggggcactt
ggtttaacgtcaatggatcacgttatcgatctgaacattaccgatgctcgtatggttggg
ttagatattcgaattaccgcaacgcttatacgaaaatag

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