Vibrio natriegens: PN96_18365
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Entry
PN96_18365 CDS
T04636
Symbol
benD
Name
(GenBank) 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase
KO
K05783
dihydroxycyclohexadiene carboxylate dehydrogenase [EC:
1.3.1.25
1.3.1.-]
Organism
vna
Vibrio natriegens
Pathway
vna00362
Benzoate degradation
vna00364
Fluorobenzoate degradation
vna00622
Xylene degradation
vna01100
Metabolic pathways
vna01120
Microbial metabolism in diverse environments
vna01220
Degradation of aromatic compounds
Module
vna_M00551
Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol
Brite
KEGG Orthology (KO) [BR:
vna00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PN96_18365 (benD)
00364 Fluorobenzoate degradation
PN96_18365 (benD)
00622 Xylene degradation
PN96_18365 (benD)
Enzymes [BR:
vna01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.1 With NAD+ or NADP+ as acceptor
1.3.1.25 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase
PN96_18365 (benD)
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Motif
Pfam:
adh_short
adh_short_C2
KR
DUF6401
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
ALR17926
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Position
2:773277..774056
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AA seq
259 aa
AA seq
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MSARFINKVMIVTGAAQGIGKRVAELAASEGATLVLVDIADYVHGVASQLQEQGTEVLAL
QADLETWQGAQSVMEKAYAQYGRIDILINNVGGTIWAQPFEYYQPEQIEKEVQRSLFPTL
WCCRAVIPYMLEQKGGAIVNVSSVATRGLMRVPYGASKGGVNALTVNMAFEYAERGIRIN
ATAPGGTEAPARLTPRNREPQQEREKGWYQTLIDQTNDTSFMHRYGTLDEQAEPILFLAS
DAAGYITGTVLPVAGGDLG
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcccgttttattaataaggtcatgattgtcaccggggctgcgcaaggtattggt
aaacgagtagccgaactggccgcgagcgaaggtgcaacgctggttctggtcgatatcgcc
gactatgtgcatggcgtggcttctcaactgcaagagcaaggaacggaagtactggcgctt
caagctgacttggaaacatggcaaggagcacaatccgttatggagaaagcgtacgcacaa
tatggtcgtatcgatattctcatcaacaatgtgggcggaaccatttgggctcagccattc
gaatattaccaaccagagcaaatagagaaggaagtgcaacggtcactgtttcctacgctt
tggtgttgccgggctgtgattccttacatgttggagcaaaagggtggggctatcgtcaat
gtctcatccgtcgctacccgaggattgatgcgtgttccctatggcgcttctaagggaggc
gtcaatgctctgacagtgaatatggcattcgaatacgccgagcgcgggatccgaataaac
gccacagcacccggaggcacagaagcgccagcaaggttaactccacgcaaccgtgaaccc
cagcaggaaagggaaaaagggtggtatcaaacccttatcgaccagacgaatgacaccagc
tttatgcatcgttatggaacgctcgatgagcaggctgaaccaatcctgtttttggcatct
gatgcagctggttacatcactggaacagtgcttcctgtggcaggaggagatttaggttag
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