Virgibacillus necropolis: CFK40_08115
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Entry
CFK40_08115 CDS
T04976
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
vne
Virgibacillus necropolis
Pathway
vne00730
Thiamine metabolism
vne01100
Metabolic pathways
vne01240
Biosynthesis of cofactors
vne04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
vne00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CFK40_08115
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
CFK40_08115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vne03016
]
CFK40_08115
Enzymes [BR:
vne01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
CFK40_08115
Transfer RNA biogenesis [BR:
vne03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CFK40_08115
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
NAD_synthase
ATP_bind_3
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
ASN04977
UniProt:
A0A221MBH1
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Position
1743440..1744639
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AA seq
399 aa
AA seq
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MEFDHILIRYGEMALKGKNRKKFYSKLQDNLRNTLVEFPEVKVKRTQGRMFVHLNGQDPA
PVMEKCKEVFGIQSLSLAIKIPNEEQQIKEAALYALKNSTGTKTFKISVKRIDKTFPIRS
QEFNKEVGAHLLLNSKDHSVNVHQPDLDLKIEIRTEATYITCDVIKGAGGFPVGTSGKSL
LLLSGGIDSPVAGYLAMKRGVAIEAVHFHSPPFTSERAKQKVVDLASELTNYGSSIRLHI
VPFTKLQQLVFQKMPDRYSMTIMRRMMLRISEAICKKESILSMTTGESLGQVASQTMDSM
NCINEVTNYPVIRPLITMDKLDIIDVSRKINTYDISIRPFEDCCTIFVPKAPKTKPKREK
VNYFESTINFDALIQEAVEETEVIKITKETKEDQYQDLF
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggaatttgatcacatattaattcgctatggtgaaatggccttaaagggtaaaaataga
aagaaattttatagtaagcttcaggataatttgcgaaacaccttagtagaatttccagaa
gttaaggtgaaacgaactcagggacgaatgtttgttcacttaaatggccaagatcccgca
ccggtcatggagaaatgcaaagaagtatttggaattcagagtttaagcttagcaataaaa
attccaaatgaggaacaacagataaaggaagcggcattgtatgctttaaaaaatagcact
ggaacaaaaacgtttaaaatcagtgtaaaacgaattgataaaacatttcctatccgatca
caggaattcaataaagaagttggagcacatttactactaaattcaaaagaccattcagta
aatgttcatcagccagatttggacctgaaaatagaaattcgaacggaagcgacctatatt
acgtgtgacgtaataaaaggtgcaggtggatttcctgttggaacttccggtaaatcattg
ttactattgtcaggcggtatagacagtcctgtcgcaggctatttagctatgaagcgcggt
gtggcaatcgaagcggtacattttcattctccgccctttacaagtgaacgtgcaaaacaa
aaagtagtggatttggcatctgaactaacaaattacggttcttccattagactgcatatt
gtgccgtttacaaaacttcagcaattagttttccaaaaaatgcctgatcggtattcgatg
acaattatgcgaagaatgatgttacgcataagtgaagcaatctgtaaaaaagaatcaata
ttatctatgacaacaggtgagagtttaggacaggtagcaagtcaaacaatggatagtatg
aattgtataaacgaggtgacaaattatccagtcattcgtccattaatcacgatggacaag
cttgatattattgatgtttccagaaaaataaacacctatgatatttcgatccgtcctttt
gaagattgttgtaccatctttgttccaaaagctcctaaaacaaaaccgaaacgagagaaa
gtaaattattttgagtcaacaatcaattttgatgcgttaattcaagaagcagtggaggaa
actgaggttatcaaaattacaaaagaaacaaaggaagaccagtaccaagatttattttaa
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