Vibrio nigripulchritudo: VIBNI_A0032
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Entry
VIBNI_A0032 CDS
T02871
Symbol
fadB
Name
(GenBank) Fatty acid oxidation complex subunit alpha [Includes: Enoyl-CoA hydratase/Delta(3)-cis-Delta(2)-trans-enoyl-CoA isomerase/3-hydroxybutyryl-CoA epimerase; 3-hydroxyacyl-CoA dehydrogenase]
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vni
Vibrio nigripulchritudo
Pathway
vni00071
Fatty acid degradation
vni00280
Valine, leucine and isoleucine degradation
vni00310
Lysine degradation
vni00362
Benzoate degradation
vni00380
Tryptophan metabolism
vni00410
beta-Alanine metabolism
vni00640
Propanoate metabolism
vni00650
Butanoate metabolism
vni00907
Pinene, camphor and geraniol degradation
vni00930
Caprolactam degradation
vni01100
Metabolic pathways
vni01110
Biosynthesis of secondary metabolites
vni01120
Microbial metabolism in diverse environments
vni01200
Carbon metabolism
vni01212
Fatty acid metabolism
Module
vni_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
VIBNI_A0032 (fadB)
00650 Butanoate metabolism
VIBNI_A0032 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
VIBNI_A0032 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
VIBNI_A0032 (fadB)
00310 Lysine degradation
VIBNI_A0032 (fadB)
00380 Tryptophan metabolism
VIBNI_A0032 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
VIBNI_A0032 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
VIBNI_A0032 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
VIBNI_A0032 (fadB)
00930 Caprolactam degradation
VIBNI_A0032 (fadB)
Enzymes [BR:
vni01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
VIBNI_A0032 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
VIBNI_A0032 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
VIBNI_A0032 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
VIBNI_A0032 (fadB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DUF5546
Motif
Other DBs
NCBI-ProteinID:
CCO56255
UniProt:
U4JTT8
LinkDB
All DBs
Position
1:complement(31930..34101)
Genome browser
AA seq
723 aa
AA seq
DB search
MIYQSNTLQVKELKDGIAELSFCSPGSVNKLDLATLESLDQALDALKDHSGLRGLILTSD
KDSFIVGADITEFLGLFAKPEDELDQWVQFANSIFSKLEDLPIPTLSAMSGHALGGGCEC
VLATDFRIGDTTTSIGLPETKLGIMPGFGGCVRLPRVIGADSAMEIITQGKACRADEALK
VGLLDAVVDTESLRQSAITTVSQAANGTLDWQSRRHQKTSALTLSKMEAMMSFTMAKGLV
AQKAGPHYPAPMTAVIAIEEAARSARDEALDVERKHFVKLAKSEEAKSLVGLFLNDQYIK
GLAKKSAKSASKDTARAAVLGAGIMGGGIAYQSALKGVPVMMKDIAQASLDLGMTEASKL
LNKRLSRGRIDGFKMSGILASITPSLHYAGIENSDVIVEAVVENPKVKAAVLSEVETLVD
DNTVITSNTSTIPINLLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGEHTSEETINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSQLLRDGADFTKVDKIMERKFGWPMGPAY
LLDVVGIDTAHHAQAVMAEGFPERMGKEGKDVIDALFESDRYGQKNGTGFYQYSVDKKGR
PKKTFSDEILPVISSVCAAQQAFDDDTIMQRMMIPMINEVVLCLEEGIIASPQEADMALV
YGLGFPPFRGGVFRYLDSIGIAEFVAMAKPYADLGAMYQPPQMLIDMAERGESFYQTQQT
GTL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaatcaaatactctacaagtaaaggaactgaaagacggcatcgccgagctt
agcttttgctctccaggctcagtcaataagctcgacctagctactttagaatcgctcgat
caggcgctggatgcacttaaagaccattcaggcttgagagggcttattctcacctcggat
aaagacagctttattgtgggtgcggatatcaccgaatttcttggcttgtttgcaaagcct
gaagacgaactggaccagtgggtgcagtttgcaaacagtattttcagtaagttggaagat
ttgcccattccgactctatcggcaatgagcggtcacgctctgggcggtggttgcgaatgc
gttttggctaccgactttcgtattggtgataccactaccagcattggactaccagaaacc
aagttaggcatcatgccgggctttggtggctgcgtcaggctgcctcgtgttatcggcgca
gacagcgccatggaaatcatcacacagggtaaagcctgccgagctgatgaagcgttaaaa
gttgggcttctggacgccgtagtagataccgaatcactgcgccaatcggcaatcacgact
gtttcccaagccgcaaacggcactctagactggcaaagccgccgtcaccagaaaacatca
gccctcaccttgagcaaaatggaagccatgatgagctttaccatggctaagggcttagtc
gcgcaaaaagcaggaccacattacccagcaccgatgacagcagtgatcgcgattgaagaa
gcggctcgcagcgcaagagacgaagcgcttgatgttgaacgcaaacactttgttaagctc
gccaaatcagaagaagccaaatctttggttggtttgttcctgaatgaccaatatatcaaa
gggctggcgaagaaatccgccaagtccgcatcgaaagatacagcacgtgccgcggtactc
ggcgctggcatcatgggaggcggcattgcttaccaatcggcgctgaaaggcgtgccagtg
atgatgaaagacatcgcacaggcatcgctcgacctaggtatgacggaagcatcgaaactg
ctgaacaagcgtctgtctcgtggtcgcatcgacgggtttaagatgtctggaattctggct
tcgattaccccaagcttgcactatgcaggcattgagaattctgatgtcatcgtagaagca
gtcgtagaaaacccgaaagtcaaagcggcagtgttaagcgaagtggaaacattggtcgat
gacaacacggtgatcacctccaacacctcaaccatccccatcaacttgttggcaaagtcg
ctgaagcgaccagagaacttctgtggcatgcacttcttcaatccggtacatcgcatgcct
ctcgtcgaaattatccgaggtgagcacacctcagaagagaccatcaatcgcgttgtggcg
tacgctgcgaaaatgggtaaatccccgatcgtagtcaacgattgcccgggattcttcgtc
aaccgcgtgctcttcccgtacttcggcggattcagtcaattgctgcgcgatggtgccgac
ttcaccaaagtcgacaaaatcatggagcgcaaatttggctggccaatgggtccggcgtat
ttgcttgatgtggtcggaattgataccgcccatcacgcccaggcagttatggcggaaggc
ttcccagaacgaatgggtaaagaaggcaaagatgtgattgatgcgttgtttgaatcggat
cgctacggtcagaaaaacggtacaggtttttaccaatacagcgtagacaagaaaggcaga
ccaaagaaaacattcagcgatgaaatcctccctgtgatttcttctgtctgtgcagctcaa
caagcctttgacgatgacaccatcatgcaacgtatgatgattcctatgattaacgaagtc
gtgttgtgtttagaagaaggcattatcgcctctcctcaagaagccgacatggcattggtg
tacggattaggtttcccaccattccgaggtggtgtcttccgctacctagacagcatcggt
attgccgagtttgtagcaatggcaaaaccatacgcggaccttggtgctatgtatcagcca
ccacaaatgctgatcgacatggcggaaagaggcgaaagcttctaccaaactcagcaaact
ggcacgttataa
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