Vibrio nigripulchritudo: VIBNI_A1788
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Entry
VIBNI_A1788 CDS
T02871
Symbol
gdhB
Name
(GenBank) NAD-specific glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
vni
Vibrio nigripulchritudo
Pathway
vni00220
Arginine biosynthesis
vni00250
Alanine, aspartate and glutamate metabolism
vni00430
Taurine and hypotaurine metabolism
vni00910
Nitrogen metabolism
vni01100
Metabolic pathways
vni01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
VIBNI_A1788 (gdhB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
VIBNI_A1788 (gdhB)
00220 Arginine biosynthesis
VIBNI_A1788 (gdhB)
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
VIBNI_A1788 (gdhB)
Enzymes [BR:
vni01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
VIBNI_A1788 (gdhB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT2
GDH_HM3
GDH_ACT3
GDH_HM1
GDH_HM2
Holin_BhlA
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
CCO57889
UniProt:
U4K5F3
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All DBs
Position
1:complement(1867497..1872338)
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AA seq
1613 aa
AA seq
DB search
MTARENVVPVLLEKVYKLIQDKLELAHQPLVTKLAQHLFSTIGQEDLVQRNESDLYGAVV
SLWHHISEKQAKDISVRVFNPTVSRHGWKSTHTIVEIVVPDSPFLVDSVKMALARLDLSS
HLMLHGPTRIARDKNNNIKGVNEKSGDSLSLFHIEVDMLADKAKMTDLKNELVSILTDTG
LVVADWKPMATKLNQVIKEIEDQRVALPVEKERVDETIAFLKWLGNHNFTFMGYKEYDLV
AVEGDHELRPTEEKGLGIFSVDSRVRAVKLSDLADSARLEAKKPYLLIVTKGNTASHIHR
PAYTDYIGIKKIGKNGKVIGEHRFTGLYTSAVYNQSVANIPLIRDKANRILESSGYLQGA
YSYKALHNILENFPRDELLQATEQELLQVGSGVVQMQDRDLLRLFIRKDPFGRFFSCMVY
VTKERYNTQLRRQTQRILGQYLNSDQEVEFTTYFSESPLARTHYIVHVKNNNIDIDVKEI
EQNLMEVSSSWDDRLQEAIIANTGESTGLPLSKEYLRAFPRSYKEAMLPGSAVADIERLE
ALDTPEDLGMLFYRPQEESHDSKAVHLKLYHREQPIHLSDVLPMLENLGLRVIGEAPYEV
RKSNGVTYWILDFSMLLASNVSVDLREARDRFQQAFADIWSGTLESDGFNRLVLGAGLTG
REVTILRSYARYMRQVGFPFSQSYIEETLAHHPNIAKGLVDLFSKRFEPKFKGAKKNQTE
LINKINEQLDAVESLDDDRIIRRYMDMILATLRTNYYQKADNGLPKPWLALKLKPTEIPE
IPQPVPAFEIFVYAPDIEGVHLRGGKVARGGLRWSDRQEDFRTEILGLVKAQQVKNTVIV
PVGAKGGFICKRQPNLTTRDEIFAEGQRCYKQFIRALLDVSDNIVEGNVVYPDSVVRHDE
DDAYLVVAADKGTATFSDLANSVADEYNFWLGDAFASGGSNGYDHKAMGITAKGGWESVK
RHFREMGVNCQTTDFTCIAVGDMAGDVFGNGMLLSKHIRLQAAFNHLHIFIDPNPDSAKS
WKERDRLFNLPRSSWEDYNKKLISKGGGIFSRRAKSIDLTPEIQKMLGTRKSSMAPNDLI
KAILQMEVDLFWNGGIGTYVKASSETHTDVGDRANDALRIDGRDMKAKVVGEGGNLGMTQ
LGRIEYALNGGRVNTDFVDNVGGVDCSDNEVNIKIFLNSLVANGDLTVKQRNQILDKMED
EVSEIVLKDAYWQSESISVSEQQGPSLVKEQIRFIHTMERAGYLDRALEYIPDDDTLLER
EKMGQALTRPELSVLVAYGKMVLKEQLVCDEISQDEFHAQQLVSYFPSELRRNYLDQMVN
HPLKAEIIATCLANQMVNEMGCNFITRMQEETGASVVDIANAYSAAREIFELGGIMKQIR
DFDNTATTIAQYDLMYAIRRILRRLSRWLLRNRSNKSTVKELVALYHDDVQAIMKNLDTL
LVEEEVKEHNDLADLWIAQGIDRSVANYVARLSSLYSALDISSVAREQGKTVEEAAKMYF
TLGDRLSLHWFLKQITNQAVENNWQALARASFREDLDWQQRLLTAQVLNCDCSSGKVKVD
KALDEWMENNKSSLVRWENILNEFKVGSVHEFAKFSVALRELTLLNLNCASNE
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcacgagaaaacgttgtgccggttcttcttgaaaaagtttacaaactgattcaa
gacaaactcgagcttgcccaccaacctttagtgacaaaacttgctcaacacctgtttagt
accataggtcaggaagacctggtgcaaaggaatgagtccgatctctacggtgccgttgtc
agcctgtggcatcacatcagtgagaaacaggcgaaggatatttcggtaagagtatttaac
cctacggtaagccgacatggatggaagtctacccatacgatcgttgaaattgtggtacct
gatagcccattcttagtggactcggtgaaaatggcgttagctcgcttagatctttccagt
cacttaatgctccatggtcccactcgaattgctcgcgataaaaacaataacatcaaaggc
gtaaacgaaaagtcaggagacagcctgtctcttttccatatcgaagtcgatatgctggca
gacaaagccaagatgacagatctgaaaaatgaacttgtctctattctgacggatactggt
ttagtggttgcggattggaaaccaatggcaacgaaactgaaccaggtaattaaagaaatt
gaagatcaacgcgttgcgcttccggtagaaaaagagcgcgttgatgaaaccattgcgttc
ttaaagtggttaggcaatcacaacttcacctttatgggatacaaggaatacgaccttgtt
gccgtagaaggggatcacgagctgcgcccaactgaagaaaaagggttgggaatattctct
gtggatagccgggtgcgcgctgtgaaactttcggatcttgctgactcggcgagactggaa
gccaaaaagccttacttgctgatcgtcaccaaaggtaataccgcgtcccacattcaccgt
ccagcctataccgattacatcggtatcaagaagattggtaagaatggcaaagtgatcggt
gaacacagatttactggtctttatacgtcagcagtatataaccagagtgtggcgaacatt
cctctgattcgtgacaaagcgaaccgtattcttgaatcaagcggctatttgcaaggggcg
tactcttacaaagcgcttcacaatattctggaaaacttcccacgtgatgaactgcttcag
gcaactgagcaagaattgctgcaagtggggtcgggtgttgtgcaaatgcaagatcgtgac
ttgctaagactcttcattcgaaaagacccatttggtcgtttctttagctgtatggtttac
gtgactaaagagcgatacaacactcagcttcgccgtcagactcaacgcattcttggtcag
tacttgaattccgatcaagaagtagagttcaccacttatttctctgaaagcccactggcg
agaacgcattacattgttcacgttaagaacaacaacatcgatattgatgtcaaagagata
gagcagaaccttatggaagtatcttcatcctgggatgaccgactacaagaagcgatcatt
gccaacactggtgaaagcacaggtttgccattatccaaagaatatctgcgagctttccct
cgttcttataaggaagccatgctgccaggttctgcagtggcagatattgaacgccttgaa
gcattagatacaccagaagacttgggcatgcttttctaccgtcctcaggaagaaagccat
gactcaaaagcggtacaccttaagttgtaccatcgcgaacaacctattcatttgtctgat
gttcttccaatgttggaaaacctcggattgcgcgtcattggtgaagcaccgtatgaagtt
cgcaagtcgaatggggtgacatactggatcttagatttctctatgttgctggcttctaat
gtatccgtcgatcttcgcgaagcacgtgatcgtttccaacaagcgtttgccgacatctgg
tctggtacgctagaaagcgatggcttcaaccgattggtattgggtgcaggtttgaccggg
cgtgaagtaacgattcttcgaagctatgcacgctatatgcgtcaagtcgggttcccgttc
agtcagagctacattgaagagacgctggcgcatcacccaaatattgcaaaagggctggtg
gatctgtttagcaaacgctttgaacctaagttcaagggagcgaagaagaaccagactgag
ctgatcaacaagatcaacgagcagttagatgcggttgagagcttagatgatgatcgtatc
attcgtcgttacatggatatgatccttgcgacgcttcgtactaactactaccaaaaagcg
gataatggactgccaaagccttggctggcgcttaagcttaagccgacggaaattccggaa
atcccacaacctgttcctgcgtttgagatcttcgtttatgccccagatatcgaaggtgtt
cacctgcgtggcggtaaagtggcacgcggtggtttgcgttggtcagaccgacaagaagat
ttccgtacagaaattttaggtttggtgaaagcacagcaagttaagaacacggttattgtt
ccagttggtgcgaaaggtggtttcatctgtaaacgccagccaaacctaacgactcgtgat
gagatatttgcggaaggtcagcgttgttacaaacaattcattcgagcattgctagatgta
tcggacaacattgtcgagggtaatgttgtatatccagacagtgtggttcgccacgatgaa
gacgatgcctacttggttgtagcggcagataaaggtacagcaacattctctgaccttgcc
aactcggttgcagatgaatacaacttctggctgggtgacgcgtttgcttctggcggttct
aacggttacgaccacaaagccatgggtatcaccgcgaaaggtggctgggagtcggtgaaa
cgtcacttccgagaaatgggcgttaactgtcagacaacagatttcacctgtattgccgtt
ggtgatatggcgggtgacgtgtttggtaacggcatgctgctttctaagcatattcgtttg
caggcagcgtttaaccatctgcacatcttcattgatccaaatccagattctgccaagagc
tggaaagagcgtgatcgcttgttcaaccttcctcgttcaagctgggaagactacaacaag
aagcttatctctaaaggcggtggcattttctcccgccgagcgaagtctatcgacctgaca
ccagaaattcagaaaatgctgggtactcgtaagagttcgatggcaccgaatgacctgatc
aaagcgatcttgcagatggaagttgatctgttctggaacggtggtatcggtacttacgtc
aaagcgtccagtgaaactcataccgatgtaggtgatcgcgctaacgatgcattgcgtatt
gatggtcgtgacatgaaagccaaggttgttggtgagggcggtaacttgggtatgactcaa
ttgggtcgtattgaatacgcgcttaatggtggtcgagtcaataccgacttcgttgataac
gttggtggtgtggactgctcagataacgaagtgaacattaagatcttcctgaacagtctg
gttgcaaacggcgatctaacagttaaacaacgtaaccagatcttggataagatggaagac
gaagtgtctgaaatcgtattgaaagatgcgtactggcagtccgagtccatttcggtcagt
gagcagcaaggtccttctttggtgaaagagcaaattcgctttattcacactatggagaga
gcaggctatcttgaccgtgcactggaatacattccagatgacgatacattgcttgagcgt
gagaaaatgggtcaggcactgacgcgtcctgagttatcagtattagttgcttacggcaaa
atggtgctgaaagagcagttggtgtgtgatgaaatctcgcaagacgaattccatgctcag
caattggttagctacttcccatctgagttacgccgtaactatttagatcagatggttaac
cacccactgaaagccgaaatcatcgcaacttgccttgcaaaccagatggttaacgagatg
ggttgtaacttcatcactcgaatgcaggaagagacgggagcttcagttgttgatattgcc
aatgcatattctgctgcgcgtgagatcttcgagcttggcggcataatgaaacagatccgc
gattttgataatacagcgacaacgatcgcacagtatgatctgatgtatgcgatccgccga
atccttcgtcgcttgagccgttggttgctaagaaaccgttcgaacaagtcgacagtgaaa
gagttggttgctttgtaccatgatgatgttcaggcaatcatgaagaatctggatacgctt
ctggtagaagaagaagtgaaagagcacaacgatcttgctgacctgtggatcgcgcagggc
attgatcgctcagtagcgaactatgttgctcgcttatctagtctctactcagcactggat
atatcctcagtagctcgtgagcaaggtaaaacagtggaagaagccgcgaaaatgtacttc
acattgggcgatcgtctttcattacactggttccttaaacaaatcaccaatcaggcagtc
gaaaataactggcaagcgttggcaagagcgtcattccgagaggatctcgattggcaacag
cgtttgttaactgcacaagtacttaactgtgattgcagttctggaaaagtgaaagtagac
aaagcattggatgaatggatggagaacaataaatcgtcattggttcgttgggaaaacatt
ctaaacgagtttaaggtcggttctgtccatgaattcgctaaattttccgtcgctctgaga
gaattaacgttattaaatttgaattgtgcttcaaatgagtaa
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integrated database retrieval system
