Vibrio nigripulchritudo: VIBNI_A1953
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Entry
VIBNI_A1953 CDS
T02871
Name
(GenBank) putative CHASE and GGDEF domains family protein
KO
K20959
diguanylate cyclase [EC:
2.7.7.65
]
Organism
vni
Vibrio nigripulchritudo
Pathway
vni05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VIBNI_A1953
Enzymes [BR:
vni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
VIBNI_A1953
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GGDEF
CHASE
MiaE_2
FakA-like_C
HetR_C
Gemini_mov
Motif
Other DBs
NCBI-ProteinID:
CCO58048
UniProt:
U4KFQ7
LinkDB
All DBs
Position
1:complement(2084590..2086137)
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AA seq
515 aa
AA seq
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MPLSTQRQQKPKKSALPWLTLGVILFVTLFFVYLAAISQQNHTFRIFDNLAERQSQMLKV
LVEKDIDFIGAAANFFHSVEPENWGQFPIFAEEVIQDSSSLIGLQWMPKVSKENLEEHMA
QVRKQYPDFQLHTIPKDQPKQYGFILPEGEDAYIVSDIYPRSPRNTKLIGFYSSRDRFRL
ILEDITKTGDSNISDKIRLLQDGEDRGLEKTGMLVYHPVFSHQDDSLLGVMVGVVRTTRY
FENLMLRTAAEQELVIQVKDIGFDAEDDPILFSSTGWSETEGLKIRKTISLQNREWILKF
RLLAPMTANDKWTLASIALCGLVVGLLAAFVVNMISKEKYRLAQKVDEQTRELRYLVEHD
TLTGIYNRRAFNSLFATMLEKEEPFSLVGFDIDKFKVINDRYGHAAGDKALQHVASIISE
ELNEGDFFARVGGDEFCILTYDTNSSILSAYLNRLIRKVASSPVECSPHQIDITLSVGAK
PRTDENGEELMKAVDGLMYDSKQAGRNCVSVSEVA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgccattgagtacacagagacaacaaaaaccgaaaaagagtgctttgccctggctgacg
ttgggggtcattctctttgtgactttattcttcgtttaccttgctgccataagccaacaa
aatcataccttccgaatttttgacaatttagccgagcgccaaagccagatgcttaaggtt
ttggtcgaaaaagacatcgacttcattggtgctgccgcgaacttctttcactctgttgaa
cctgaaaactggggacaatttcccatatttgcggaggaggtgatccaggattcttcaagc
ttgattggtttgcagtggatgccgaaagtttcaaaagagaatcttgaagaacatatggct
caggtcagaaagcaatatcccgatttccagctccacacgattccgaaagatcagcccaaa
caatatggttttattctccctgaaggtgaggatgcctacatcgtttccgacatttatccc
agaagccctcgtaacaccaaattgataggcttttactcatccagagaccgttttcgcctg
attttggaagacatcaccaaaacgggtgattccaatatttcagataagattcgtctctta
caggatggagaagacagagggctggaaaaaacgggaatgctggtttatcacccggttttt
tctcatcaggatgacagccttctaggggttatggttggtgtcgttcgtaccactcgatat
tttgaaaatctgatgttaagaaccgcagccgagcaggaattggttattcaggtaaaagac
attgggtttgacgcggaagatgatcctattctgttctcaagtacaggttggtctgagacc
gaagggttaaaaattcgtaaaaccattagcctgcaaaatcgcgagtggattttgaagttt
cgcttgttggcaccaatgaccgctaatgataaatggacgttagcgagcattgctctatgt
ggtttggtagttgggttattggctgcattcgtggtgaacatgatttcaaaagagaaatat
cgactggcgcaaaaagtggacgagcaaacccgcgaactgcgttatctggtagaacacgat
acgcttacaggaatctacaatcgccgcgctttcaactctctattcgcaaccatgctggaa
aaagaagagcctttcagcttggtaggttttgatattgataaatttaaagtcatcaatgat
cgctatggacatgctgctggtgacaaggcccttcaacacgttgccagtattatcagtgaa
gagctgaatgaaggtgatttctttgcccgagtaggaggtgatgagttttgtattcttacc
tacgataccaactccagtattctttccgcttacttaaaccgactgattcgcaaagtggcg
tcgtctccggtcgagtgttcacctcatcagattgatattacgttgagtgttggagcaaaa
cctagaaccgacgaaaatggtgaagagctgatgaaagccgtcgacggtttgatgtacgac
agtaaacaagctgggcggaattgtgtctctgtttctgaagtcgcatga
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