Vibrio nigripulchritudo: VIBNI_A3138
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Entry
VIBNI_A3138 CDS
T02871
Symbol
cpdB
Name
(GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
vni
Vibrio nigripulchritudo
Pathway
vni00230
Purine metabolism
vni00240
Pyrimidine metabolism
vni01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
VIBNI_A3138 (cpdB)
00240 Pyrimidine metabolism
VIBNI_A3138 (cpdB)
Enzymes [BR:
vni01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
VIBNI_A3138 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
VIBNI_A3138 (cpdB)
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Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
Motif
Other DBs
NCBI-ProteinID:
CCO59151
UniProt:
U4K1M4
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All DBs
Position
1:3329874..3331835
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AA seq
653 aa
AA seq
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MKLAVKPLSVAVLGGMLTIAGPAMADTIKLRIIETTDIHTNVMDYDYYKDKPSQKIGLTR
AATLVKEAQKEVTNSVLVDNGDLIQGSPMGDYMAAKGIEKGEVHPVYKAMNQLNYDVGNI
GNHEFNYGLDFLMETLDDANFPYISANVFDKKTGEHYFTPYIIKTHQFKDTDGDMQEVKV
GYIGFVPPQIMVWDKKNLEEKVFAKDIKETAEELVPKMKAEGADVIVAIPHSGVSTDPFK
AGAENSTLYLSEVEGIDAIAFGHAHAVFPGKGFDNIQGIDNKKGTINGVVSVMPGRWGSH
VGVMDLVLEKDDEGWKVSDGQAEARPIFDKKTKSALAEPDQAIVKALESDHKGTRDFVNQ
PIGKANDVMYSFLALVQDDPTIQIVNLAQKDYVERFIQGDPDLDGIPVLSAAAPFKAGGR
KNDPANFTEVESGELTFRNAADLYLYPNTLVALKVTGNEVKEWLECSAGQFKQIDVNSTA
PQGLIDWDGFRTYNFDVIDGVNYQIDITQPPKYDGDCKVINPDSERIIGLTYQGKPIVMK
QDFIIASNNYRAYSNKFPGTGSEFVAFDAPDENRTVLANYISRVSQEKGQFAPSADNNWT
FAPINSNTKLDIRFETSPSDKAASFIKDKGQYPMERVATDDVGFGVYRLELQK
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggctgtgaaacctctttccgttgcagtacttggcggcatgttaaccattgcg
ggtccggcaatggcagacaccattaaattaagaatcatcgaaacgacagatattcacacc
aatgtgatggattatgactattacaaagacaagccatctcagaaaattggtctgacgcgt
gcagcaactctggtgaaagaagctcagaaagaagtgactaacagtgtgctggtcgacaat
ggggatctgattcaaggtagcccaatgggtgactacatggctgccaaaggcatcgaaaaa
ggcgaagttcaccctgtttataaggcgatgaaccagcttaactacgatgttggtaacatt
ggtaaccatgagttcaactatgggttggacttcttaatggaaacgctggacgacgccaat
ttcccttacattagcgccaatgttttcgataagaaaaccggcgagcactacttcaccccg
tacatcattaaaactcaccagtttaaagacaccgatggtgacatgcaggaagtcaaagtg
ggttacattggctttgtaccgccacaaatcatggtttgggataagaaaaaccttgaagaa
aaagtcttcgcaaaagacatcaaagagaccgccgaagaacttgtaccaaagatgaaagca
gaaggcgctgacgtgattgtcgcgattccccactccggtgtatcaaccgacccattcaaa
gcgggtgctgaaaactcaaccttgtacttgtctgaagtagaaggtattgacgccattgcg
tttggtcatgcgcacgccgtatttccgggtaaagggttcgataacattcaaggcatcgat
aacaagaaaggcaccatcaatggtgtagtttctgtcatgccaggtcgctggggtagccat
gtcggtgtaatggacttggtacttgaaaaagacgatgagggctggaaagtctcagacggg
caagcagaagcacgcccaatctttgataagaaaaccaaaagtgcgctggctgagccggat
caagcgatcgtaaaagcgctggaatccgatcacaaaggcacgcgtgactttgttaaccag
ccaattggtaaagcgaacgatgtgatgtacagcttccttgcgctggttcaggatgaccca
acgattcaaatcgtcaacttagcgcaaaaagactacgtagaacgctttattcagggcgac
cctgatcttgatggtattcctgttttatctgcggctgcaccgtttaaagctggcggtcgc
aaaaatgacccagctaacttcacagaagttgagtctggcgagctgaccttccgtaacgct
gcggatctttatctatatccgaatactttggttgccttgaaagtcacaggtaatgaggtg
aaagagtggctggagtgttctgccgggcaattcaagcaaatcgatgtgaattccactgcc
ccgcaaggtctgatcgactgggacggtttccgtacttacaacttcgatgtaattgacggt
gtgaactaccaaatcgatattactcaacccccgaaatacgatggcgactgtaaagtgatt
aatcctgactcggagcgtattattggtctgacttatcagggtaagcctatcgttatgaag
caagacttcatcatcgcttccaacaattaccgcgcatacagcaacaagttcccgggtacg
ggttctgaatttgtggcgttcgatgccccagatgaaaaccgcacggttttggcgaattac
atttctcgtgtcagtcaggaaaaaggtcagtttgcaccaagtgcagacaacaactggaca
tttgcgccgatcaacagcaacaccaagctggacattcgctttgaaacatcacctagcgat
aaggcagcttcctttattaaagataaaggtcagtacccaatggagcgtgtagcaacagac
gacgtaggtttcggtgtctaccgcctagaacttcagaagtaa
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