Vibrio nigripulchritudo: VIBNI_A3783
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Entry
VIBNI_A3783 CDS
T02871
Symbol
ubiD
Name
(GenBank) 3-octaprenyl-4-hydroxybenzoate carboxy-lyase (3-polyprenyl-4-hydroxybenzoate decarboxylase)
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
vni
Vibrio nigripulchritudo
Pathway
vni00130
Ubiquinone and other terpenoid-quinone biosynthesis
vni01100
Metabolic pathways
vni01110
Biosynthesis of secondary metabolites
vni01240
Biosynthesis of cofactors
Module
vni_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
VIBNI_A3783 (ubiD)
Enzymes [BR:
vni01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
VIBNI_A3783 (ubiD)
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Gene cluster
GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
CCO59741
UniProt:
U4K3B8
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All DBs
Position
1:complement(3995933..3997795)
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AA seq
620 aa
AA seq
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MSFKDLRDFIDRLEQDGRLKRITHPVDPHYEMTEISDRTLRASGPALLFENPIGYDFPVL
TNLFGTTERVAIGMGRQDVSELREVGKLLAYLKEPEPPKGFKDALDKLPVFRQVLNMPAK
RLRKAACQQVVWQGDQVDLDKIPVMSCWADDVAPLLTWGLTVTKGPSKKRQNLGIYRQQK
IGKNKVIMRWLAHRGGALDLRDWMETNPGKPFPVSVAFGADPATILGAVTPVPDTLSEYA
FAGLLRGSKTEVVKSVSNDLEVPASAEIVLEGYIDPSEYADEGPYGDHTGYYNEVEKHHV
FTVTHVTMRENPIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEIIDFYLPPEGCSY
RMAVVSMKKQYPGHAKRVMMGVWSFLRQFMYTKFVIVVDESVNTRDWNEVVHAMTTQMDP
VRDTVMIENTPIDSLDFASPVVGLGSKMGLDATIKWDAELSVSAKPEEVMPEAEAVDKLV
AQFKQNHPELIDLYLPETANGRSMAIISINKSEAWQGRNLMNALWEEFEAHIHLQYIIIC
DEDVDVRDWNDVIWAITTRMDPARDTLMKQEANLPTTQMGLDATNKVEGEETQREWGRPI
KKDPAVVAKIDEIWDQLGIE
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaaggatttacgcgactttatagatcgtctggaacaggacggtcggctaaaa
cgcatcactcacccggttgaccctcactatgaaatgacagaaattagcgatcgcacgctg
cgtgccagtggtcctgctctgttatttgaaaacccaattggttacgacttccccgtgcta
actaatctctttggtaccacggagcgggtcgccataggtatgggaaggcaagatgtctcc
gagctgagagaagttgggaagctcctggcttatctaaaagagcctgagccgccgaaaggg
tttaaagacgctttagataaactcccagtttttcgtcaggttttgaatatgcctgcgaag
cgcttgcgaaaagcagcatgtcagcaagtggtgtggcagggcgatcaggttgatctggat
aagattccagtgatgagctgttgggcagatgacgtagcccctcttttaacatgggggtta
accgtcactaaaggtccgagcaagaaacgccagaacttagggatttatcgccagcaaaag
attggtaaaaacaaagtcatcatgcgttggcttgctcaccgtggcggcgcgctcgatctc
agagactggatggaaaccaacccaggtaaacctttcccagtttccgtcgcgtttggcgcg
gatccagcgaccatccttggcgcggtaaccccagtgccagatacattatctgaatacgca
tttgcaggcttgcttcggggcagtaaaaccgaagtggtgaaatcggtcagtaacgacttg
gaagtacctgccagcgcagagattgttctggaaggttacatcgaccctagcgaatacgcc
gatgaaggcccttatggcgatcatactggttattacaatgaggtagagaaacaccacgtc
tttaccgtcactcatgtgaccatgcgtgaaaacccaatttaccacagtacctacacaggt
cgcccgccggatgaaccagcggtactgggggtcgcactgaacgaagtgtttgtgcctatc
ttacagaagcaattcccagagattatcgacttctatcttccaccggaaggttgctcgtat
cgcatggccgttgtgtcgatgaaaaagcaatatccgggacacgccaaacgcgtcatgatg
ggagtttggtcattccttcgtcagttcatgtacactaagttcgttatcgtggtcgatgag
agtgtcaatactcgagattggaatgaagtggttcatgccatgactacgcagatggatcct
gttcgcgatacagtcatgatagaaaacacgccaattgattctttagacttcgcttctcca
gtagtaggtctcgggtcgaagatggggttggatgccacgataaagtgggatgcagaactg
tccgtttctgcaaaacctgaagaagtgatgcctgaagcggaagccgtagataaattggtt
gctcagttcaaacagaatcacccagagctgattgatctctatttgcctgaaactgccaat
ggcagaagtatggcaattatcagtatcaataaaagtgaagcctggcaggggcgtaactta
atgaatgcgctttgggaagagtttgaggcgcatatccaccttcaatacatcatcatttgc
gatgaagacgtagatgtaagagattggaacgacgttatttgggcgataaccacacgtatg
gatcctgctcgcgatacattaatgaagcaagaagctaatctcccaacaacccaaatgggg
ctggatgcgaccaataaggtcgaaggagaagagacccagcgtgaatggggtcgacccatt
aagaaagaccctgcggtagtcgcaaaaattgatgagatttgggatcaactaggaatagaa
tga
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