Vibrio nigripulchritudo: VIBNI_B1184
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Entry
VIBNI_B1184 CDS
T02871
Name
(GenBank) putative EAL, GGDEF and GAF domains protein
KO
K20962
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vni
Vibrio nigripulchritudo
Pathway
vni05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vni00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VIBNI_B1184
Enzymes [BR:
vni01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VIBNI_B1184
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAF_2
L31
Motif
Other DBs
NCBI-ProteinID:
CCO60947
UniProt:
U4K6L1
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All DBs
Position
2:1210654..1212561
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AA seq
635 aa
AA seq
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MSKIDVSQIEIPAYMQKSWQQVVNLVAELSDVPSALIMKVHRHSIEVYKANDSTESPYRE
NECEPLNGQLYCETVITEQRSLSVPNALKDKEWDDNPDVSLGMIAYHGLPLNWPCGEPFG
TICILDNQENAFTPTIMALLDSFRESVESQLTLLYQQYQLEQTNKELRSRVQSRTQDLAS
LNYSLGTEIDRRKAAEQKVLYQQSHDLGTGFLNRLALIDEAQTLLGQMKSTDHTLAFVHV
GFTNGRRLLAKHGYEVFDTVLKEYRKRVGFIDVLHSITARTSTIDLVFALEIDEAQHNLA
ALCQRLVDIGQSEFFINGQPLHLHAFIGVATSYDADNANLMLKHAGEAMLACKDSGKKYA
FYANSNITTPTNNQLESYLLQAVRNDDLTLYFQPKVSPRNGYWLGAEALLRWNHPVLGQV
SNDSLIQLAEKNGLIFEVGNYVLRSAIQRAAEWTKYMKDFRVAINVSAVQLRDPNFVDQI
EQLLDYYKLNPNSLELEVTESSLIADEFLAGQTLRKLHGLGVTLSLDDFGTGYSSFSYLK
KYPFDCIKIDKSFINQISGSEQDKEIIRSIIHVAKKLKLKVVMEGVESHDQEQFILDEGC
DYVQGYLYGKPMNSREFENSLISKKFNGQRIAARH
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaattgacgtcagtcagatagaaatcccagcgtacatgcaaaagagctggcag
caagtcgtaaacttagtcgcggaattatcggacgttccgtctgcacttatcatgaaagtg
catcgacactctatcgaagtctacaaagccaacgattctaccgaatcaccctaccgggaa
aacgagtgtgagcctcttaatggtcagctttactgtgaaacggtcatcaccgaacaacga
tcattgagtgttcccaatgccttgaaagataaagaatgggatgacaaccctgatgtgtcg
ctcggtatgatcgcctatcacggtcttcctctcaactggccttgcggcgaaccatttgga
accatctgtattctggataaccaagaaaacgctttcactccgacaataatggcattgttg
gattcttttcgggaatccgttgagtctcagttgacgctgctctaccagcaatatcagtta
gaacaaacaaataaagagttgagaagtcgggttcagagccgcacgcaagatcttgccagt
cttaactattctttgggaactgagatcgaccgacgtaaagccgcagaacaaaaggtgctt
taccaacagtcgcatgatttgggcaccggctttctgaatcgtcttgcgcttatcgacgaa
gctcagactttgctgggtcagatgaaatcaacggatcacacattggcatttgtgcatgtc
ggctttaccaatggtcgccgcctgcttgccaagcatgggtacgaagtgtttgatacagtg
ctcaaggagtatcgaaagcgagttggcttcatcgatgtattacacagcataaccgcacgc
acatcgaccatcgatctggtctttgctcttgaaatcgacgaagctcagcataacctggca
gcgctctgccaaaggctagtagacattgggcagtctgagtttttcattaatgggcagcct
ttgcacctacatgcgtttattggcgtggcaacgtcttacgacgcagacaacgccaatctg
atgttaaagcatgcgggagaagccatgctggcgtgcaaagattccggtaaaaagtacgca
ttttatgccaactccaatattaccacccccaccaataaccagcttgaaagctacctgcta
caagcagtgcgaaacgatgatttaactctgtattttcaaccaaaggtttcaccgagaaat
ggctattggttgggtgccgaggcgttgctccggtggaaccaccctgttcttggtcaggtc
tcgaacgactctttaattcagctcgcagagaaaaatgggctgattttcgaggtcggtaat
tatgtgctccgcagtgccattcagcgtgcagccgaatggaccaaatacatgaaggatttt
cgagtcgcgataaacgtgtcagcggtgcagttgagagatcctaattttgtcgatcagata
gaacaactccttgattactataagctaaatcctaacagcttagagcttgaggtgaccgag
tccagcctgatagccgacgaatttctcgccgggcagacacttagaaaactccatggtcta
ggggtgacactgtcactagatgactttggaacgggctactcttcctttagttaccttaaa
aaatacccattcgactgcatcaagattgacaaaagcttcatcaatcaaatttcaggtagc
gagcaggacaaggaaatcatccgttcaattatccatgttgcgaagaagctgaaactcaaa
gttgtgatggaaggtgtcgaaagccatgaccaagagcaattcattcttgatgaaggctgt
gattatgttcagggctacttgtatggaaaaccaatgaacagtcgagagtttgagaacagc
ttgatcagcaagaaattcaacggacaaagaatcgcagcgcgtcattga
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