Vibrio neocaledonicus: D3H41_01080
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Entry
D3H41_01080 CDS
T06228
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl00540
Lipopolysaccharide biosynthesis
vnl01100
Metabolic pathways
vnl01250
Biosynthesis of nucleotide sugars
Module
vnl_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
D3H41_01080
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vnl01005
]
D3H41_01080
Enzymes [BR:
vnl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
D3H41_01080
Lipopolysaccharide biosynthesis proteins [BR:
vnl01005
]
Core region
D3H41_01080
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
ThiF
adh_short
KR
Phage_T7_Capsid
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
QCO84775
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All DBs
Position
1:complement(219996..220937)
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AA seq
313 aa
AA seq
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MIIVTGGAGMIGSNIVKALNEAGINDILVVDNLKNGKKFKNLVDLDITDYMDRDDFLTQI
MAGDDFGPIEAIFHEGACSATTEWDGKYMMLNNYEYSKELLHYCLDREIPFLYASSAATY
GDTDTFVEEREYEGALNVYGYSKQQFDNYVRRLWQDAEEHGETLSQITGFRYFNVYGPRE
DHKGSMASVAFHLNNQLNAGENPKLFAGSESFKRDFVYVGDVCKVNLWFLENGVSGIFNC
GTGRAESFEEVAKAVIKHHGKGQIETIPFPEHLKGAYQEFTQADLTKLRTAGCDVEFKTV
AEGVAEYLTIQNS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgtaactggtggcgctggcatgatcggcagcaacattgttaaagcactaaac
gaagctggtattaacgatatcctggttgtcgacaacctaaaaaatggcaaaaagtttaag
aacttagttgatctggacatcacagattacatggatcgtgacgactttctgacccaaatt
atggcgggcgatgattttggtccgattgaggcaattttccacgaaggtgcttgttctgca
acgactgagtgggatggtaagtacatgatgctaaacaactacgagtactctaaagagctg
cttcattactgtttagatcgcgagattccattcctatacgcttcttcagcagccacttac
ggcgatacagatactttcgttgaagaacgcgaatacgaaggtgcactgaatgtatacggt
tactcgaaacagcagtttgataactacgttcgtcgcctatggcaagacgctgaagaacat
ggtgagaccctttctcaaatcaccggcttccgctacttcaacgtatatggcccacgtgaa
gaccataaaggtagcatggcatcagttgcgttccacctaaacaaccaacttaacgcaggt
gaaaatcctaaattgtttgcgggcagcgaatcattcaaacgcgacttcgtttacgttggt
gatgtatgtaaagtaaacctgtggttcttagaaaacggcgtatcaggtatttttaactgt
ggtactggccgtgctgaatcttttgaagaggtagcaaaagcagttatcaagcatcatggc
aaaggccaaattgaaaccatcccattccctgagcacctaaaaggcgcttaccaagaattc
acacaagcggatctgaccaaactgcgcaccgcaggttgtgatgttgaattcaagacagtt
gcagaaggcgttgccgaatacttgactatccaaaacagttaa
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