KEGG   Vibrio neocaledonicus: D3H41_03410
Entry
D3H41_03410       CDS       T06228                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
vnl  Vibrio neocaledonicus
Pathway
vnl00740  Riboflavin metabolism
vnl01100  Metabolic pathways
vnl01110  Biosynthesis of secondary metabolites
vnl01240  Biosynthesis of cofactors
vnl02024  Quorum sensing
Module
vnl_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:vnl00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    D3H41_03410 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    D3H41_03410 (ribD)
Enzymes [BR:vnl01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     D3H41_03410 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     D3H41_03410 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: QCO85204
LinkDB
Position
1:710470..711597
AA seq 375 aa
MTQHTPERAFSDLDFAMMSRAIKLAKRGIFTTAPNPNVGCVIVRDEEIVGEGYHHRAGEP
HAEVHAMRMAGEKAVGATAYVTLEPCSHYGRTPPCAEGLIKAKVARVVCAMVDPNPKVAG
RGIQMLRDAGIEVQIGLLEQDALALNPGFIKYMRTGMPFVQLKMAASLDGQSALNNGQSQ
WITSPAARQDVQRYRAMSGGILSTSKTVIDDNASLNVRWDDLPDSVQAQYLQEELRQPVR
VILDRQNHLTDALKLFHTDGERVIVRSDGDCIPLLDSADQIDLSTTLKRISDEHHINHLW
VEAGATLASAMIKANLVDELIVYLAPKLMGSDGRGLIGALGLSAMADVIDLNITDVRMVG
VDIRITATIKRNEIR
NT seq 1128 nt   +upstreamnt  +downstreamnt
atgactcaacacactcctgaaagagcgttttctgatttagatttcgccatgatgtcacga
gctattaagttagcgaaacgtggcatttttaccaccgcccctaatccaaatgtagggtgt
gtcatcgttcgtgatgaagaaattgtcggtgaaggctatcaccatcgtgctggtgagccg
catgccgaagtgcacgcgatgcgcatggcgggtgaaaaagcagttggtgcaaccgcttat
gtgacgctagaaccttgctctcattacggccgtacaccgccatgtgccgaagggctgatt
aaagccaaagtggcacgtgtggtttgcgccatggtagacccaaacccgaaagttgcaggt
cgcggcatccagatgttacgtgatgccggaattgaagtacaaatcggcttgttagagcaa
gatgcccttgcccttaaccctggttttataaagtacatgcgtacaggcatgccgtttgtt
caattaaaaatggcagccagtttggatgggcaaagcgcactcaataatggtcagagccaa
tggatcacctccccagcggcccgccaagatgtgcagcgttatcgagcaatgagtggtggc
attctttctactagcaaaacggtgattgatgataatgcatcactcaacgtgcgctgggat
gacttacctgatagtgttcaagcgcagtatttacaagaagagcttcgtcaaccagtacgt
gtaatcttagatcgtcagaaccatttaactgatgcgctcaagctgttccataccgatgga
gagcgagttattgttcgctctgatggagactgtatccctctattggacagcgctgaccaa
attgacttatcaacgacattaaaacgtatctcggatgagcaccacatcaatcacttatgg
gttgaagctggagctacgctagcgagtgcgatgataaaggctaatcttgtagatgagctc
attgtttaccttgcgccaaaactcatgggcagcgatggtcgggggcttatcggtgcttta
gggttaagcgctatggctgacgtcatagatttaaacattacagacgttcgtatggttggg
gtagacattcgcatcaccgccaccataaaacgtaatgaaattagataa

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