Vibrio neocaledonicus: D3H41_03470
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Entry
D3H41_03470 CDS
T06228
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
vnl
Vibrio neocaledonicus
Pathway
vnl00730
Thiamine metabolism
vnl01100
Metabolic pathways
vnl01240
Biosynthesis of cofactors
vnl04122
Sulfur relay system
Module
vnl_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
D3H41_03470 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
D3H41_03470 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vnl03016
]
D3H41_03470 (thiI)
Enzymes [BR:
vnl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
D3H41_03470 (thiI)
Transfer RNA biogenesis [BR:
vnl03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
D3H41_03470 (thiI)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
Dak2
NAD_synthase
PAPS_reduct
HTH_Tnp_1_2
Transcrip_reg
Motif
Other DBs
NCBI-ProteinID:
QCO85216
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All DBs
Position
1:721570..723018
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AA seq
482 aa
AA seq
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MKFIVKPHPEIFVKSESVRKRFTKILECNIRNIIKSRTESVAVFNRRDHIEVTSESNEFH
AEVLEVLTHTPGIHHVLEVKQTEFKDLHDIFEQVLELNRAALENKTFVVRAKRRGKHDFT
SIELERYVGGGLNQAIESASVKLRNPDVTIKVEVSNDKLNQVLSRHKGLGGFPLGTQEDV
LSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQVSHYLWNKYGSSAKVRFI
SVDFEPVVAEILEKVDDGQMGVILKRMFMRAAGMIAQKMKIEALVTGEALGQVSSQTLTN
LRHIDNVTDTLILRPLINWDKEDIINLAREIGTEDFAKTMPEYCGVISKKPTVKAVKGKL
EAEEEKFDFSILEQVVQEARMMDIRDIAKESEQAAPEVEQVQAVEEHAVVLDIRSPEEED
DNPLEIEGVDVKHIPFYKLGTQFGDLDQSKTYLLYCDRGVMSRLQALYLQEQGFSNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttattgtaaagccccatccagaaatttttgtaaaaagtgaatctgtgcgtaag
cgcttcacaaagattttagagtgcaacattcgtaacatcattaagagccgcacggagtct
gtcgcggtatttaaccgtcgtgatcacattgaagtgacctctgagagtaacgaattccac
gctgaagttcttgaggttttgactcatacaccaggcattcaccacgtactggaagtgaag
caaactgaatttaaagacttgcacgatatcttcgagcaagtgctagaactcaaccgtgct
gcactcgaaaataaaacctttgttgtacgtgcgaagcgtcgtggcaagcatgactttacc
tctattgaactagagcgttatgtaggcggtggtttaaatcaagcgattgaaagcgctagt
gttaagctacgaaacccagacgtgacgatcaaggtagaagtctcgaacgacaagctaaac
caagtgttgtctcgtcataaaggcctaggtggtttcccactgggtacgcaagaagacgta
ttaagcctgatctcgggtggtttcgactctggtgtttcaagctatcttcatatcaagcgt
ggttcaaaagtacattactgcttctttaacttaggtggtccagcacacgaaatcggcgtt
aagcaggtttctcactacctatggaacaaatacggttcttcagcaaaagtacgttttatc
tcagttgatttcgaacctgtggttgcggaaatcctagagaaagtcgatgacggccaaatg
ggcgtgatcttgaagcgtatgtttatgcgtgcagcaggcatgatcgctcagaagatgaag
atcgaagcattggtaacaggtgaagcgctaggtcaagtatcgagccaaacgctaaccaat
ctacgccatatcgacaacgtaactgacacgctgattctgcgtccacttatcaactgggat
aaagaagacatcatcaatctagcacgtgaaatcggcacagaagatttcgcaaagacaatg
ccagaatactgtggtgttatctctaagaagccaaccgtgaaagcggtgaaaggcaagcta
gaagctgaagaagagaaattcgactttagtatccttgagcaagtggttcaagaagctcgc
atgatggacattcgtgatattgcgaaagagtctgagcaagccgcaccagaagtagagcaa
gttcaagcggtagaagagcacgcggttgtgctagatattcgtagtcctgaagaggaagac
gataacccacttgaaatcgaaggtgtggatgtgaaacatatccctttctacaagctgggt
acacagtttggtgacttagaccagtctaagacatacctactttactgtgaccgcggtgtg
atgagccgtctgcaagcgctttacttgcaagagcaaggcttcagcaacgtaaaagtttac
cgtccatag
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