Vibrio neocaledonicus: D3H41_11955
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Entry
D3H41_11955 CDS
T06228
Symbol
mnmC
Name
(GenBank) bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vnl03016
]
D3H41_11955 (mnmC)
Enzymes [BR:
vnl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
D3H41_11955 (mnmC)
Transfer RNA biogenesis [BR:
vnl03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
D3H41_11955 (mnmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
NAD_binding_9
Pyr_redox_2
NAD_binding_8
Pyr_redox_3
FAD_binding_2
F420_oxidored
NAD_Gly3P_dh_N
Pyr_redox
Nmad5
Motif
Other DBs
NCBI-ProteinID:
QCO86740
LinkDB
All DBs
Position
1:2409453..2411471
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AA seq
672 aa
AA seq
DB search
MTSIKNAELGWNEAGTPVSDQFDDVYFSNVNGLEETRYVFLKQNHLPERWQEFDQRRFVI
GETGFGTGLNFLAVCQWFSEFRRQHPDATLKELHFISFEKYPLSKADLKKAHEAWPELAE
YAEKLQKHYPAAVPECHRIVLEDGAITLDLWFGDIKDCMPQVPYNEQGLINAWFLDGFAP
SKNPEMWNQGLFNNMAKLAKQDCTVATFTAAGFVRRGLNEAGFTMKKVKGFGTKREMIAG
SMEQREKQSNHLPWFNRTASSNLDSIAIIGGGIASAALAKTLVRRGQNVTLYCKDKQPAK
GASGNRQGAVYPLLNGPHTGVSRVFAPAFLFARQFVEQAAQEIDFDHDWCGVTQLMWDDK
STDKLEKMLAGNFTPELIQKLSAEETANTIGLPIDMASVHYPMGGWLCPAELTRGLIKQL
EKTSLLSTKFEHHVEALDWDEKRQLWLLTASGQTFEHSTVVIANGHEFQTLSQTASLPMG
QVKGQVSHAPATETLSQLKTVLCYDGYMTPVNPSNQHLCIGASYDRSHLDYEFDENAQKD
NAEKLVKCVPNQTWAKEVDITDNQSRQGIRCVSRDHLPFVGNVGDFETIKTQYANLQNQK
AEEVETIHQYPNLFCFLGLGSRGLSSAPLLAEVLASQICGDPLPLPVDVLTELHPSRMWV
RKLRKGKAITEL
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaataaaaaacgcagaacttggttggaacgaagctggtactccggtttcagac
caatttgatgatgtttacttctctaacgtaaacggtcttgaagagacacgctacgttttc
ttaaaacaaaatcatctcccagaaagatggcaggaatttgaccaaagacgttttgtcatt
ggtgaaacaggatttggcacgggattaaacttcttagcagtatgccagtggtttagtgag
tttcgtcgtcagcatccggacgcaacattgaaagagctgcattttattagctttgaaaaa
tacccattaagcaaagccgatttaaagaaggcgcatgaagcttggcctgagctagctgag
tacgcggaaaagttacaaaagcactaccctgccgctgtgccggagtgtcatcgcattgtt
ttagaagacggcgcaatcacgctcgacctttggtttggtgacattaaagactgcatgccg
caagtcccatacaacgaacaaggtttgattaatgcttggttcttagatggattcgcgcca
agcaaaaacccagagatgtggaaccaaggcctgttcaacaacatggcaaagctagccaag
caagattgtacagttgccacgtttaccgcagcaggctttgtacgtcgtggtttgaacgaa
gctggctttacaatgaaaaaggtgaaaggtttcggcactaaacgagaaatgatcgccggc
tctatggagcaacgtgaaaagcagtcgaaccatctcccttggttcaatcgcacagcatct
agcaatcttgattcgattgccatcattggtggtggtatagccagcgcggcgttagcgaaa
acgttagttcgtcgtggccaaaacgtcaccctttactgtaaagacaaacaaccagccaaa
ggagcttcaggcaatcgacaaggagccgtttatccgctgcttaatggcccgcacacgggt
gtttcacgagtgtttgctcctgcatttttgttcgcacgtcagtttgttgaacaagcagca
caagagatcgattttgatcatgactggtgtggcgtaactcagttgatgtgggatgacaaa
tccacagacaaactggagaaaatgcttgcgggtaacttcactccagagctcattcaaaag
ctgtccgccgaggaaactgcgaacactatcgggttacctattgatatggcgtctgtgcac
tacccaatgggagggtggctgtgccctgccgagttaactcgcgggttaattaaacaattg
gagaagacgtcgttactctcaacgaagtttgaacaccatgttgaggcattagattgggat
gaaaagcgtcagctctggctactaacggcgagtggtcaaacatttgagcactcaacggtt
gtaattgcgaacggccatgagttccagacattgagtcaaaccgcttccctaccaatggga
caagtgaaaggacaagtcagtcatgcgccagcaaccgaaacgctgagtcagctgaaaacg
gtgttgtgttacgacggttacatgacacctgttaacccaagtaatcaacacttgtgtatc
ggtgcaagctacgaccgcagtcaccttgactacgaatttgatgaaaacgcccaaaaagat
aatgcggaaaagctagtgaaatgtgtaccgaatcaaacatgggcaaaagaggtagatatc
actgataatcaatctcgccaaggtattcgttgtgttagccgagatcacttaccatttgtc
gggaatgtgggtgactttgagacgatcaaaacgcaatacgccaacttacaaaatcaaaaa
gcagaagaggtagaaaccattcatcagtaccctaacctattctgcttcttaggtttagga
tctcgtggactgagctctgcaccattattagctgaagtgttggcctcccagatctgtggg
gacccgctgccattaccggttgatgtattgaccgaacttcacccaagtcgaatgtgggtt
cgtaaactaagaaaaggcaaagccattaccgagctgtaa
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