Vibrio neocaledonicus: D3H41_16055
Help
Entry
D3H41_16055 CDS
T06228
Symbol
rsmD
Name
(GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
vnl
Vibrio neocaledonicus
Brite
KEGG Orthology (KO) [BR:
vnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vnl03009
]
D3H41_16055 (rsmD)
Enzymes [BR:
vnl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
D3H41_16055 (rsmD)
Ribosome biogenesis [BR:
vnl03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
D3H41_16055 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
Met_10
Methyltransf_25
MethyltransfD12
TRM
Methyltransf_15
RsmJ
RrnaAD
Methyltransf_4
Methyltransf_31
DNA_methylase
tRNA_U5-meth_tr
Methyltr_RsmB-F
PrmA
Methyltransf_12
SAM_MT
Methyltrans_SAM
PRMT5
Spermine_synth
N6-adenineMlase
Methyltransf_11
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
QCO87433
LinkDB
All DBs
Position
1:3243556..3244155
Genome browser
AA seq
199 aa
AA seq
DB search
MVRRRQQNSSQKKPTTGFVRIISGLWRGRKLPVHDAEGLRPTTDRVKETLFNWLAQDVPQ
AKCLDLFAGSGGLGFESASRQAEQVTMVELNPQAFQQLQKNVASLNANNIQVVNTDALSF
LKQPGSAHHVVFIDPPFRKGLLDETVALLEQNGWLAEDAMIYIETEKELNIADLPENWQL
HREKTAGQVSYRLYERTSA
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggtaagacgtcgccagcaaaactcatcacaaaaaaagccaacaacgggctttgttcgc
attattagtggcttatggagaggcagaaaacttcctgtacacgatgctgaaggcttacgc
cccacgacagatcgcgtcaaagaaacgctgtttaactggttagctcaagatgtaccacag
gcaaaatgtctcgacttgtttgctggctctggcggcttgggatttgagtcagcttcgcgc
caagcagagcaagtgaccatggttgagctaaacccacaagctttccaacagttacaaaag
aatgttgcctctcttaacgcgaacaacatccaagtggtaaataccgacgcactgagtttt
ttgaagcaaccgggttctgctcaccatgtggtgtttattgacccaccgtttcgcaaaggt
ctattggatgagaccgtggctctgctagaacaaaatggctggctcgcggaagatgcgatg
atttatattgaaacagaaaaagaactcaatattgccgacttaccagaaaactggcaatta
catcgagaaaaaacagcaggccaagtgagctatcgtctgtacgaacgtacctccgcataa
DBGET
integrated database retrieval system
