Vibrio neptunius: KW548_14045
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Entry
KW548_14045 CDS
T08906
Symbol
fadJ
Name
(GenBank) fatty acid oxidation complex subunit alpha FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
vnp
Vibrio neptunius
Pathway
vnp00071
Fatty acid degradation
vnp00280
Valine, leucine and isoleucine degradation
vnp00310
Lysine degradation
vnp00362
Benzoate degradation
vnp00380
Tryptophan metabolism
vnp00410
beta-Alanine metabolism
vnp00640
Propanoate metabolism
vnp00650
Butanoate metabolism
vnp00907
Pinene, camphor and geraniol degradation
vnp00930
Caprolactam degradation
vnp01100
Metabolic pathways
vnp01110
Biosynthesis of secondary metabolites
vnp01120
Microbial metabolism in diverse environments
vnp01200
Carbon metabolism
vnp01212
Fatty acid metabolism
Module
vnp_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vnp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
KW548_14045 (fadJ)
00650 Butanoate metabolism
KW548_14045 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
KW548_14045 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
KW548_14045 (fadJ)
00310 Lysine degradation
KW548_14045 (fadJ)
00380 Tryptophan metabolism
KW548_14045 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
KW548_14045 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
KW548_14045 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
KW548_14045 (fadJ)
00930 Caprolactam degradation
KW548_14045 (fadJ)
Enzymes [BR:
vnp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
KW548_14045 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
KW548_14045 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
KW548_14045 (fadJ)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
LEM
Motif
Other DBs
NCBI-ProteinID:
QXX06209
LinkDB
All DBs
Position
1:complement(3006857..3008980)
Genome browser
AA seq
707 aa
AA seq
DB search
MSEQKAFELKIDEQDIAWLSIDVPGEKMNTLQAAFAQEMEDIFTQLKEKKSSVKGLIVHS
LKPDNFIAGADVRMLDACNSASQAQALAEQGQQMFQQLSDLPYPVIAAIHGPCLGGGLEL
ALACDYRVCTNSDKTRLGLPEVQLGLLPGSGGTQRLPRLVGLLPSLDMILTGKQLRAKKA
KKLGVVDAVVPETILLEVAKSFVEKHAGKSRAKRKVSTKEKLIANTGLGRKVIFEQASKK
TLEKTRGNYPAAEAILEVIRYGLEKGFEKGQQKEAQRFGELVMTSESKALRSIFFATTEM
KKENGSDAEPKAIERAAVLGGGLMGAGISHVSVSKAKVPVRIKDVSNDGVLNALKYNYKL
FDKQRKRRIISNAQLQSKMLQMSGGTDFTSFNHADVVVEAVFEDLSLKQQMVSDVEENAK
ESTIFATNTSSLPIHQIAEKAQRPENIVGLHYFSPVEKMPLVEVIPHETTSEETISTVVE
FARKQGKTPIVVKDCAGFYVNRILAPYMNEAAQVLMSGEPIEQLDKALLNYGFPVGPITL
LDEVGVDIGAKIMPILVEELGERFQGPDVFDILLNDNRKGRKTGKGFYTYKGKKKEVDKS
VYKLLSLSPESKMAEKDIAMRCVLPMLNEAVRCLDEGIIRSPRDGDIGAIFGIGFPPFLG
GPFRYMDQIGVKKLVEMMNEHAQKYGDRFAPCDGLLTRAGLEKSFYE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcaaaaagcgtttgagctaaaaatagacgaacaagatatcgcctggctgtct
attgatgttccgggtgagaaaatgaacaccttgcaggcagcgtttgctcaggaaatggaa
gacatttttacccaactgaaggagaaaaaatcctcagtaaaaggtttgattgttcactct
ctgaaacctgataacttcatcgcaggcgctgatgtaaggatgctggatgcatgtaacagt
gcttcacaagcgcaagctttagccgagcaaggtcaacagatgtttcagcaactatctgac
ttaccttatcctgttattgctgccattcacggcccttgcttgggtggcggtttagagctt
gcccttgcatgtgattaccgtgtttgtacgaactcagataaaactcgactagggttacca
gaagtacagcttggactgctcccaggctctggtggtacgcagcgactgccacgtcttgtt
gggctattgccatctttggatatgatcctgacaggtaagcagctacgtgcaaaaaaagcc
aagaagcttggtgttgtggatgccgtggtacctgagacgattttacttgaggtagcgaag
agctttgtcgaaaagcatgctggaaaatcgcgagctaagcgcaaggtttcaacgaaagag
aagctaatcgctaataccggtcttggtcgtaaagtgatctttgagcaagcatcaaagaag
accctcgaaaagactcgtggcaattacccagcggcagaggcaatcctagaagtgattcgc
tacggcttagagaaagggtttgagaaaggccagcaaaaagaagcgcagcgctttggtgag
ctagtgatgacctcagagtcgaaagcacttcgctctatattcttcgcgacaactgagatg
aagaaagagaatggcagcgatgctgagcctaaagcgattgaacgtgcagcggttcttggt
ggtggcctgatgggtgccggaattagccacgtcagcgtctcgaaagcgaaagttccagtg
cgtatcaaagatgtctctaacgatggtgttcttaacgcgttgaagtacaactacaagctg
tttgataagcagcgtaagcgtcgcattatttctaacgcacaactgcagtctaaaatgtta
caaatgtcaggtggaaccgatttcaccagcttcaatcatgcggatgttgttgttgaagcg
gtatttgaagatctgagcctcaagcagcaaatggtgtccgatgtggaagagaatgcaaaa
gagagcactatttttgcaactaatacctcttcgctgcccattcatcagatagcggaaaaa
gctcagcgacctgaaaacatcgtcggcctgcattattttagcccagtagaaaaaatgccg
ttggttgaggtgattcctcatgaaacaacgtctgaagaaacaatctcgactgtcgttgag
tttgcacgtaagcaaggtaaaacgccgattgttgttaaagattgcgcgggtttttatgtg
aatcgtattcttgctccgtacatgaatgaagcggcacaagttttgatgtctggtgagccg
atagagcaattggataaagctttgctgaactatggcttcccagtaggcccgataaccttg
cttgacgaagttggtgtcgatatcggtgctaagatcatgccgattctggttgaagaatta
ggcgaacgtttccaaggccctgacgtgttcgatatcttgctgaatgacaatcgtaaagga
cgtaagacaggtaaaggtttctatacctataaaggtaagaagaaggaagtcgacaagtca
gtgtataagctacttagcttatcaccagagtctaagatggcagagaaagacatcgcgatg
cgctgtgtgctacctatgttgaatgaagcggttcgctgtctggacgaaggcattattcgt
agccctcgagatggtgacattggtgctatttttggtattggcttccctcctttccttggt
ggtccattccgctatatggaccagattggtgtgaagaaactggtagaaatgatgaacgag
cacgcacagaaatacggggatcgtttcgctccttgtgatggcttgttaacccgagcaggg
ttagaaaaatcgttttacgagtaa
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