Vibrio navarrensis: IF132_15460
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Entry
IF132_15460 CDS
T07785
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vnv
Vibrio navarrensis
Pathway
vnv00071
Fatty acid degradation
vnv00280
Valine, leucine and isoleucine degradation
vnv00310
Lysine degradation
vnv00362
Benzoate degradation
vnv00380
Tryptophan metabolism
vnv00410
beta-Alanine metabolism
vnv00640
Propanoate metabolism
vnv00650
Butanoate metabolism
vnv00907
Pinene, camphor and geraniol degradation
vnv00930
Caprolactam degradation
vnv01100
Metabolic pathways
vnv01110
Biosynthesis of secondary metabolites
vnv01120
Microbial metabolism in diverse environments
vnv01200
Carbon metabolism
vnv01212
Fatty acid metabolism
Module
vnv_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
IF132_15460 (fadB)
00650 Butanoate metabolism
IF132_15460 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
IF132_15460 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
IF132_15460 (fadB)
00310 Lysine degradation
IF132_15460 (fadB)
00380 Tryptophan metabolism
IF132_15460 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
IF132_15460 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
IF132_15460 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
IF132_15460 (fadB)
00930 Caprolactam degradation
IF132_15460 (fadB)
Enzymes [BR:
vnv01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
IF132_15460 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
IF132_15460 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
IF132_15460 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
IF132_15460 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DAO
Motif
Other DBs
NCBI-ProteinID:
QOD70120
LinkDB
All DBs
Position
1:complement(1922714..1924885)
Genome browser
AA seq
723 aa
AA seq
DB search
MIYQAETLQVKELHDGIAELTFCSPNSVNKLDLATLESLDKALDALSTHAGLKGLMLTSN
KEAFIVGADITEFLGLFAKPEEELDQWLKFANSIFNKLEDLPVPTISVLTGHTLGGGCEC
VLATDLRIGDATTSIGLPETKLGIMPGFGGCVRLPRVIGADSAMEIITQGKACRAEEALK
IGLLDAVVDSASLRESALHTLTQAINEQLDWKTRRTQKTSPLTLSKLEAMMSFTMAKGLV
AQVAGPHYPAPMTAVQTIEQGARFARDQALDVERQHFIKLAKSEEAKALVGLFLSDQYIK
GIVKKAAKSASKETGRAAVLGAGIMGGGIAYQSALKGVPVLMKDIAQGSLDLGMTEASKL
LNKQLERGKIDGFKMAGILASITPSLHYAGIENADVIVEAVVENPKVKAAVLSEVEQQVS
AETVITSNTSTIPINLLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGEHTSDETINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSMLLRDGADFTQVDKVMERKFGWPMGPAY
LLDVVGIDTAHHAQAVMAQGFPERMGKEDRDAIDALFEANKYGQKNGSGFYSYSIDKKGK
PKKAFSDAILPVLAEVCAEPQAFDEQAIIQRMMIPMINEVVLCLQEGIIATPQEADMALV
YGLGFPPFRGGVFRYLDSVGIANFVDMAKQYSDLGAMYHVPQLLIDMASKGDTFYGSQQQ
GSI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaagccgaaaccctacaggtaaaggaattacacgacggtattgccgagctg
actttctgctcgccaaattccgttaacaagctcgacctcgccacgctcgaatcccttgat
aaagcgctggatgcactcagcacccatgctggtctaaaaggcctcatgctcacctctaat
aaagaggcatttatcgtcggtgctgacattaccgaatttttaggcctgtttgccaaacca
gaagaagagttggatcagtggctgaaatttgccaacagcatctttaataaacttgaagat
ttgcctgtaccgaccatttccgttctcactggccacacgcttggcggcggttgcgagtgt
gtacttgccacggacctacgcattggtgacgctaccaccagcatcggtttgcctgaaacc
aaactcggcatcatgcccggctttggtggctgtgtacgtctgcctcgcgtgatcggcgcc
gacagcgcaatggaaatcatcacacaaggcaaagcgtgccgtgctgaagaagcactgaag
attggcctgcttgatgcggtggtggatagcgcatcgctgcgtgaatctgcgctccacact
ctgacgcaagcaatcaacgaacagctggattggaaaactcgccgcacgcagaaaacctcg
ccactaacactgagtaagctagaagcgatgatgagcttcactatggcgaaaggtttggtt
gctcaagttgcagggcctcattacccagcgccaatgaccgcggtacaaactatcgagcaa
ggcgctcgcttcgcccgcgaccaagcactggatgttgaacgccaacacttcatcaaattg
gcaaaatcggaagaagccaaagcgctagtcggcttattccttagcgatcaatacatcaag
ggcatcgtgaaaaaagccgccaaatcggccagcaaagagactggccgtgctgcggtactc
ggcgcaggtatcatgggtggcggtatcgcctatcaatccgcgctcaagggcgtgcctgta
ttaatgaaggacatcgctcaaggttcgctagacctcggcatgactgaagcttccaaactg
ctcaacaaacaacttgagcgtggcaagatcgacggtttcaaaatggccggcatcttggca
tcgattacccctagcctgcattatgcgggtatcgagaatgccgatgtgatcgtcgaagcc
gtggtggaaaacccgaaagtcaaagcggcggtattaagcgaagtggaacagcaggtcagt
gccgagacggtgatcacctcaaacacttcgaccattccaattaatctgctggccaaatcg
ctcaagcgcccagaaaacttctgtggtatgcacttctttaacccagtgcaccgcatgccg
ttggtggaaattatccgtggtgagcacacttccgacgaaaccatcaaccgcgtagtcgct
tacgcagcgaagatgggcaagtcgccgatcgtcgtcaacgactgtcctggattctttgtt
aaccgcgtactgttcccttactttggcggtttcagcatgctgctgcgcgatggggctgat
ttcacccaagtggacaaggtgatggagcgtaaatttggctggccaatgggcccggcttac
ttactagacgtggtcggtatcgataccgcgcatcacgctcaagctgtgatggcacaaggt
ttccctgagcgtatgggtaaagaagaccgtgacgcgattgatgcgctgtttgaagccaat
aaatacggccaaaagaatggcagcggtttctacagctacagcatcgacaaaaaaggcaag
ccaaagaaagccttcagcgacgctatcttacctgtgctggctgaggtatgtgcagagcca
caagcctttgacgagcaagccattattcaacgtatgatgattccgatgatcaacgaagtg
gtgctgtgtctgcaagaaggcatcatcgcgacaccacaagaagcggacatggcgctggtg
tatggcctcggtttccctccattccgcggcggcgttttccgttacttagatagcgtgggt
attgccaactttgtcgacatggcaaaacagtactcagatctgggcgcaatgtaccacgtg
cctcaactgctaatcgatatggcgagcaaaggtgacactttctacggctcgcaacagcaa
ggttctatctaa
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