Vibrio navarrensis: IF132_15660
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Entry
IF132_15660 CDS
T07785
Symbol
ubiD
Name
(GenBank) 4-hydroxy-3-polyprenylbenzoate decarboxylase
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
vnv
Vibrio navarrensis
Pathway
vnv00130
Ubiquinone and other terpenoid-quinone biosynthesis
vnv01100
Metabolic pathways
vnv01110
Biosynthesis of secondary metabolites
vnv01240
Biosynthesis of cofactors
Module
vnv_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
IF132_15660 (ubiD)
Enzymes [BR:
vnv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
IF132_15660 (ubiD)
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Gene cluster
GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
QOD70151
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Position
1:1964428..1966275
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AA seq
615 aa
AA seq
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MSFKDLREFLDHLERHGQLKRITHPVDPAYEMTEISDRTLRAAGPALLFENPIGSNVPVL
TNLFGTPERVAMGMGRSEVKELREVGKLLAYLKEPEPPRGFKDALDKIPLFRQVLNMPAK
KLRKAPCQEIVWQGDEVDLDKIPVMSCWAEDVAPLLTWGLTVTRGPYKKRQNLGIYRQQK
IAKNKIIMRWLAHRGGALDLRDWMEANPGQPFPVSVAFGADPATILGAVTPVPDTLSEYA
FAGLLRGSKTEVVQSISNDLEVPASAEIVLEGYIDPNEFADEGPYGDHTGYYNEKEQHHV
FTITHITMRRDPIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEIEDFYLPPEGCSY
RMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKFVIVCDESVNARDWNEVVKAMTEHMEP
VQDTLMIDNTPIDSLDFASPVVGLGSKMGLDATIKWPAELATRTPVPERESHAIAECDLL
ALKQQHPEIVDLYLPPSANHQFVIASMKKERAGQSQTLLKHLWDFFAPYADIKFIILCDD
DVNVQDWHDIIWAVTTRMDPLRDTVQVKCSGSSKLGLDATNKFAPEVVREWGSPIKKDPQ
LVAKIDAIWHELGIL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaaggatttacgtgaatttcttgaccatcttgaacggcatggtcaactgaaa
cgcattactcaccctgtcgaccctgcctatgaaatgacagaaatcagcgatcgcacgctg
cgtgcggcggggcctgctttgctgtttgaaaacccgattggctcaaacgttcccgtgctc
actaatctatttggtacgcctgagcgtgtcgccatgggcatggggcgaagtgaggtcaaa
gagctacgtgaagttgggaaattgctggcttacctcaaagagcctgaaccgccacgcggc
tttaaagatgcactggataagatcccactgttcaggcaagtactcaatatgcccgccaaa
aagctgcgtaaagcgccgtgccaagagatagtgtggcagggcgatgaggttgacctagac
aagatccctgtcatgagttgctgggctgaggatgttgcgcccttacttacttgggggctc
actgtcactcgaggtccatacaaaaagcggcaaaatctgggcatttatcgacagcagaaa
atcgctaagaacaaaatcatcatgcgctggcttgctcatcgtggcggtgccttggatctg
cgtgattggatggaggcaaacccaggccaaccatttcctgtgtcggtagcgtttggtgct
gatccggcgaccattcttggcgcggtgacgccagtgccagacactctatcagagtacgct
ttcgcgggcctattgcgtggcagcaaaaccgaagtagtccaatcgatcagtaatgacttg
gaagtgcctgccagtgctgagattgtgctggaaggctacatcgatccgaatgagtttgcc
gatgaaggtccgtacggcgatcatacgggctactacaacgaaaaagagcagcatcacgtc
tttactattacgcacatcaccatgcgtcgcgatcctatctaccacagcacttacactggg
cgtccacctgatgagcctgccgtgctcggtgtggcactcaatgaagtatttgtgcctatc
ctacaaaagcagtttccagagattgaagatttctatctaccgccagaaggctgctcgtat
cgtatggccgtggtgacgatgaaaaagcagtacccagggcatgctaagcgggtgatgatg
ggtgtgtggtctttcctgcgtcagtttatgtataccaagttcgtgatagtttgcgacgaa
tcggttaacgcgcgcgattggaatgaggtcgtcaaagcgatgactgaacatatggagcct
gtgcaagataccttgatgatcgataacacaccgattgattcactcgactttgcatcgcca
gtggtagggctgggttcaaagatggggctggatgcgacgataaagtggccggctgagctg
gcaacgcgaacgccagtgccggagcgagaaagccacgcgatagctgaatgcgacttattg
gcgctgaaacaacaacacccagaaatcgttgatctctatctccctcctagtgccaaccat
caatttgttattgcgtcgatgaaaaaagagcgagctggtcagtctcaaacgttgctgaaa
catctgtgggatttctttgccccctatgcagatatcaagtttattatcttgtgtgatgat
gacgttaatgttcaagattggcacgatatcatttgggcggtaaccacacgtatggatccg
ttgagagacaccgtgcaagttaagtgctctggctcctcgaagttggggctggatgcgacc
aacaaatttgccccagaggttgtacgagagtggggcagcccgattaaaaaagatccgcaa
cttgtggctaaaatcgatgcgatttggcacgagttaggtattctatga
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