Vibrio navarrensis: IF132_15790
Help
Entry
IF132_15790 CDS
T07785
Name
(GenBank) EAL domain-containing protein
KO
K20964
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vnv
Vibrio navarrensis
Pathway
vnv05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
IF132_15790
Enzymes [BR:
vnv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
IF132_15790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
FIST
FIST_C
GGDEF
Reovirus_L2_6th
Motif
Other DBs
NCBI-ProteinID:
QOD70169
LinkDB
All DBs
Position
1:1989093..1991582
Genome browser
AA seq
829 aa
AA seq
DB search
MQTFSLWADDLEQLQEQIQGYDWQVDSPYLIQLFSAQSASVTEAYARALRMKLPRAEIIG
HSTRHMIHAGEILHHGCLIVISQFMYTQLTSAVQPYSGAPDLDSYDFRHALNLSPASCAV
VSFAVQVQRVDYPIYSAFRCEEACPPVAGGLAQTTEDGCWVLHQEKVYHNAAVAVALHGD
ALKVWTHAYSEWNPVGMYHKVTAAQGRRLIALGNRSAYDVYKHYLADNRDISLNQLINFP
LYREVNNKKEVCSVCDIHADGSMTFDRDWQVGDEVRFCYNHPSLTLEQLKHGVMELAMHQ
PESVFIYNCASRLDFIDGAEEVSAFNELATTNGSYCMGEIYSEGASLEILHHSLTYLALR
ESDEVTRFNLPSNEISSISPLFCLIRSAIADLDNMNAHMEYQLERQAMRLQESYRRDSRT
GLPNRIALKEYLNDIQADEHLLTLKLLNFNHINEKYGYQVGDELLQMLSVHFTTRLRKRL
GKGANLRIYSIGVGEWAFIFRAGLCGETIKQLFTRFADLIEQTNFEPSGLEHVDYLSISL
CGGLASRRDFPNASGDELLLKAIEARRVGVRNNTHICDAKEVQVSEEVRREQLGWLGCVS
RAILQQNIVTYAQPIFHADGKTPSAKECLVRIVENDGRIVLPGQFLPIITGTHLYTRLSR
HMIQSTLDYMQDKQEAFSINLSPQDLLSDRTLLLLEASINQLNDPSRIGLEVLESEQIKD
YGRMIEVCSHFRRLGARIIVDDFGSGYSNIDEIIKLEPEIIKLDGSLIRNIDQDEKQRKI
ANQLVRLCQVLNAKTVAEFVHNQQVCQIVQDMGVDYLQGYFLGKPQRLF
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgcagactttctctctctgggcggatgatctcgagcagttacaagaacagatacaaggc
tatgattggcaagtcgatagcccctatttgattcagcttttttccgctcagtcagcgtcg
gtgaccgaagcttatgcccgcgctcttcgcatgaagttgccgcgtgctgaaataatcgga
cacagcactcgccacatgatccacgccggcgaaattcttcatcacggctgcttgatcgtc
attagccagtttatgtatacgcagcttacctccgccgtgcagccctatagcggtgcgccc
gatctcgatagctacgattttcgtcatgcgctcaatctcagcccggccagttgcgcggtg
gtcagttttgccgtgcaagtgcagcgggtcgactatccaatctatagcgcatttcgctgt
gaagaagcttgcccgccggtggctggcggtttggctcagacaaccgaagatggctgctgg
gtgctgcaccaagagaaggtgtaccacaatgcggcagtggcggtcgcgcttcatggcgac
gcgttgaaagtatggacgcacgcttattcggagtggaacccggtcgggatgtatcacaag
gtgacggccgcgcaagggcgacgattaatcgcgctgggcaacaggtcggcctatgatgtg
tacaagcactatttggcagacaatcgcgacatctctttgaatcagctaatcaattttccg
ctttatcgcgaagtgaacaacaagaaagaagtgtgttcggtgtgcgatatccatgccgat
ggcagcatgacctttgaccgtgattggcaagtgggcgatgaggtacgcttttgctataac
cacccctctttgacgctggagcagttaaagcatggcgtgatggaactggcgatgcatcag
cccgaatcggtgtttatctacaactgcgcttcgcggcttgatttcattgacggtgctgaa
gaggtgagtgccttcaatgaactggccaccaccaatggcagttattgcatgggagagata
tacagtgaaggcgcttcgctggagattttgcatcatagcctgacctatttggcgctgcgc
gaaagcgacgaagtgacgcgttttaacttgccctccaatgagatcagcagcatttcacca
ctgttctgtttgatccgcagtgccattgctgatctggacaacatgaatgcgcatatggag
taccagcttgagcgtcaggcgatgcgtctgcaagagagctatcgccgcgacagccgtact
ggcctgcccaatcgtattgcgcttaaagagtatctcaatgatattcaagcggacgagcat
ctcctgacacttaagttgcttaattttaaccacataaatgagaaatacggttatcaagtc
ggtgatgagttattgcagatgctgtcggtccactttaccacacggctacgcaaacgcctt
ggcaaaggggcgaatctgcgtatctacagcattggggtgggagagtgggcgtttatcttt
cgcgctgggctgtgcggtgaaaccatcaaacagctcttcacccgattcgccgatctgatc
gaacaaaccaactttgagccatccgggcttgaacatgtcgactatctctccatttcactc
tgtggcggtttggcgagccgacgtgatttccccaatgccagcggtgatgaactcttgctc
aaagcgattgaagcacgtcgggttggggtgcgtaacaacacccacatttgtgatgctaaa
gaagtgcaagtcagcgaagaggtacgccgcgaacagctcggctggctgggttgtgtcagc
cgtgccatcttgcagcagaacatcgttacctatgcgcagccgatttttcacgccgatggc
aaaacgccttcagccaaagagtgtttggtgcgcattgtggaaaacgacgggcgtattgtg
ttgccggggcagtttctgccgattatcacgggcacccatctctacactcgtttaagccga
cacatgatccaaagcactctcgactacatgcaagataagcaggaggcgttttcgatcaac
ttgtcaccgcaagatttgctcagcgacagaactctcttgctgcttgaagcttcgatcaac
caactcaacgatcccagccgcattggtctggaagtgttggagtcggagcaaattaaagat
tacgggcggatgatcgaagtgtgtagccactttcgccgcttgggggcgcgcatcatcgtc
gatgattttggctctggttactccaatattgatgaaatcatcaagttggaaccggaaatc
attaagctcgatggcagcttgatccgcaatattgatcaagatgagaagcagcgcaaaatt
gctaaccaattggtgcgattgtgccaagtgttgaatgcaaaaaccgtggcggaatttgtt
cacaaccagcaggtttgccagatagtgcaggacatgggggtggattacttgcagggctat
ttcttaggtaagccgcaacggctgttttaa
DBGET
integrated database retrieval system
