Vibrio navarrensis: IF132_15825
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Entry
IF132_15825 CDS
T07785
Name
(GenBank) EAL domain-containing protein
KO
K07181
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vnv
Vibrio navarrensis
Pathway
vnv05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vnv00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
IF132_15825
Enzymes [BR:
vnv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
IF132_15825
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GFIT
Motif
Pfam:
EAL
HDOD
Motif
Other DBs
NCBI-ProteinID:
QOD70176
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Position
1:1997080..1998303
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AA seq
407 aa
AA seq
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MKSTYVARQPIFNRKKHTLGYELLFRDGENNAYPTHIASNRATYRLIVENFLSIGINPVI
QSSRCFINFPYQSLIRRLPLSLPKNKVVVEVLETCEPTDELLEAIRELHREGYVIALDDF
TLMPEWRRFLPFVHIVKLDVIALGLDNACELVREHQARRVKYHFLAEKVESAQEFEQAKE
AGFKFFQGYFFSKPEMIETKYVSPEHAVALELFREVCQLEPDFDRIEKIISQDVTLSYKL
LKLVNTQSTRLEVKIASFRQALIYLGQDKLKIFVSLVVASYISVRKPRELYNLSLQRAQF
CELMSRRHPFSRHHEQGFMIGLLSILDAMMDLSVDTLVGSLPLSDVVKQALLHREGAYGD
LIALEECFEQADWSGIEQISDKLGLSMDEVKYELIEAQRWSQELSQI
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccacttacgtcgcgcggcaacctatttttaatcgcaaaaagcatactttgggg
tatgaactgctgtttcgtgatggcgaaaacaacgcctatcccacccatattgcttcgaac
cgcgcgacctatcgtttgattgtggagaactttctctccatcggtatcaatccggtgatt
caatcctcacgctgttttatcaatttcccttaccaaagtttgatccgtcgtctgccacta
agtttgcccaaaaataaagtggtggtggaagtgttggaaacctgcgagccgaccgacgaa
ctgcttgaagcgattcgcgaactgcaccgtgaaggctatgtgatcgcgcttgatgatttt
accttgatgcctgaatggcgccgttttctgccttttgtacacattgttaaactggatgtg
attgcgctggggctcgacaatgcctgcgagctggtgcgtgagcatcaagcgcgtcgggtg
aagtaccatttcttagcggaaaaagtcgaaagcgcgcaggagtttgagcaagccaaagag
gcgggttttaagttctttcagggctattttttcagtaaacctgagatgatcgaaaccaag
tacgtcagcccagagcacgcggtggcgttggagctgtttcgcgaagtgtgccaactggag
ccggatttcgatcggattgaaaagatcatcagccaagatgtcacgctctcctacaagctg
ctgaagctcgtcaacacccagtcgacccgcttggaagtgaagattgcctcatttcgccaa
gcgctgatttatcttggccaagacaagctgaaaatatttgtctctttagtggtcgcttcg
tacatttcggtccgcaagccacgtgagctgtataacctttcgctgcagcgtgctcagttt
tgcgagttgatgtcgcgtcgccacccgtttagtcgccatcacgaacaaggttttatgatc
ggtttgctgtcgattttggatgcaatgatggatctctcggtcgacacgctggtggggagc
ctgccgctcagtgatgtggtgaaacaagcgctactgcaccgtgagggcgcttatggagac
ctcatcgcattagaagagtgtttcgagcaagccgactggagtggcattgaacagatctcc
gataaactggggttgtcgatggacgaggtcaaatacgagttgattgaagcgcagcgctgg
tcgcaggagctatcgcagatatag
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