Vogesella sp. XCS3: LCH97_00125
Help
Entry
LCH97_00125 CDS
T07617
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
vog
Vogesella sp. XCS3
Pathway
vog00540
Lipopolysaccharide biosynthesis
vog01100
Metabolic pathways
vog01250
Biosynthesis of nucleotide sugars
Module
vog_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
vog00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
LCH97_00125 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vog01005
]
LCH97_00125 (rfaD)
Enzymes [BR:
vog01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
LCH97_00125 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
vog01005
]
Core region
LCH97_00125 (rfaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
DapB_N
Motif
Other DBs
NCBI-ProteinID:
UDM17124
LinkDB
All DBs
Position
20359..21354
Genome browser
AA seq
331 aa
AA seq
DB search
MTIVVTGAAGFIGSNIVKALNARGETDILAVDNLSKGDKFVNLVGCEISDYLDKQDFISL
IGSGDFDGEITAILHQGACSDTMNHDGKYMMENNYQYTLELFEFCQAEEIPFLYASSAAT
YGKGTTFKEDRQYEGPLNVYGYSKFLFDQILRRRMAEGLTAQVAGFRYFNVYGPQEQHKG
RMASVAFHNFNQYRETGKVKLFGGYDGYADGTQSRDFVSVEDVVKVNLYFLDNPDKSGIF
NLGSGRAQPFNDVAVATVNACRRHEGKPALTLPELVEQGILEYIDFPDALKGKYQSFTQA
DIGKLRSAGYSDAMLTVEQGVDRYVDWLMSR
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgactatcgtagtgaccggtgcggccggctttatcggctccaatatcgtgaaggcgctg
aacgcgcgcggcgaaaccgacatccttgcggtggataacctcagcaagggtgacaagttt
gtcaacctggtgggctgcgaaatcagcgactacctggacaagcaggacttcatcagcctg
atcggcagtggcgatttcgacggtgaaatcaccgccatcctgcatcagggtgcctgctcc
gacaccatgaaccacgacggcaagtacatgatggagaacaactaccagtacacgctggag
ctgttcgaattctgccaggccgaggaaatccccttcctgtacgccagcagcgccgccacc
tacggcaagggcactaccttcaaggaagaccgccagtacgaaggcccgctcaatgtgtac
ggctactccaagttcctgttcgaccagatcctgcgccgccgcatggccgaaggcctgacc
gcacaagtggccggctttcgctacttcaacgtgtacggcccgcaagagcagcacaaaggc
cgcatggcttcggtggccttccacaacttcaaccagtaccgcgaaaccggcaaggtgaag
ctgtttggcggctacgacggctacgccgacggcacgcagagccgcgatttcgtgtcggtg
gaagacgtggtgaaggtgaacctgtacttcctggataacccggacaagagcggcatcttc
aacctgggttccggccgtgcgcagccgttcaacgacgtggccgtggccaccgtcaacgcc
tgccgccgccacgaaggcaagccggcactgacgctgcccgagctggtagagcagggcatt
ctggaatacatcgacttcccggacgcgctgaaaggcaagtaccagagcttcacccaggcc
gatatcggcaagctgcgcagcgccggttacagcgatgccatgctcaccgtagagcagggc
gtggaccgctacgtggactggctgatgagccgatga
DBGET
integrated database retrieval system
