Vibrio owensii: A9237_08760
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Entry
A9237_08760 CDS
T04844
Name
(GenBank) sensor domain-containing phosphodiesterase
KO
K20964
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vow
Vibrio owensii
Pathway
vow05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vow00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
A9237_08760
Enzymes [BR:
vow01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
A9237_08760
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Gene cluster
GFIT
Motif
Pfam:
EAL
FIST
FIST_C
GGDEF
YPEB_N
Motif
Other DBs
NCBI-ProteinID:
AQW58186
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Position
1:1934389..1936875
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AA seq
828 aa
AA seq
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MRAFSQLVQNVDQLNDFLVTSQCCADKRYLVQLLSTQSRDSAVSLARAILERLPNTHIIG
HSTRHVILEGEIINHGCLVCVMEFEQTTLTSAVQHYSFSPDIDGYDLKQALQLQDNSKAI
ISFSVQIERRDYPVYRVFDADGPKVSGGLAQTIDDGCWVLHQDQVYDEAVVAVALHSNTL
KTWTSAYSEWNPIGMPHKVTHAKGTRLYRLGERKALDVYKHYLADGHDLTLNQLLNFPLY
RESIGRKEVCAVTEIHPDGSMSFDRPWCLGDEVQFCYNHPSLTLEQVRHGVVELSMHQPE
AVMIYNCASRLDFIDSSDEVRAFTDISHTSGSYCMGELYGENHQQEILHHSLTYLAMREG
DEVAALNMPQQEVSTSISPLFSLIRNAIGDLNNMNAHMGYQLDRQAKKLEQSFRRDSRTG
LQNRVALQERLISIDTDEHLLTLKLLNFSHINEKYGYRVGDQLLKDLSMHFSNRLRKRLG
KPAALQLYSIGVGEWAFLFKADTSSEAIKQHFTRFADAVEQTNFEPSGLRDIDYLSISLC
GGLVSRRDFPTASPDELLLKGIEARRAGVRSNTHICNAKDIEVNEDVRKEQLGWLSCVSR
AILKQNIITYSQPIVHAYNHRPASQECLVRIMEEDGSIIAPGRFFPIISDTHLYTRLSRH
MIRSTLNYMKDQHGDFSINLSPQDLLSDKTLMLLEHAITKLNDPRRIGLEVLESEQIKDY
GRMIEVCSHFRSLGARIIVDDFGSGYSNIDEILKLEPEVIKLDGSLIRYIDKDQKQRKIA
SQLVRLCQVFNAKTVAEFVHNKEVCDIAQDMGVDYLQGYYLGEPTRLF
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcattctctcaactggttcaaaatgtggatcagcttaatgactttttagtcact
tctcagtgttgtgcagataaacgttatctggtgcaactcttatccacccaatcacgcgac
tccgccgtctcgctcgctcgggcaatactcgaaagattacccaacacgcacatcatcggt
cacagcacccgtcacgttatcttggaaggtgaaatcatcaaccatggctgcttagtgtgt
gtgatggagtttgaacaaaccacgctcacgtctgcggttcagcattattccttctcgcca
gatatcgacggctacgatctcaagcaagctttacagctgcaagataactccaaagccatt
attagcttttctgtccaaatcgaacgccgtgactatccggtgtatcgcgtatttgatgcc
gacggtccgaaggtttctggcggcttggctcaaaccatcgatgacggttgttgggttttg
catcaagaccaagtttatgacgaagcggttgtcgcggttgccttgcacagcaatactttg
aaaacatggacgagtgcgtattctgagtggaacccaatcggtatgccgcacaaggttact
cacgccaaagggacgcgcttgtatcgcttaggagagcgtaaagcgctggatgtgtacaaa
cattaccttgctgatgggcacgacctgacgcttaatcaactgctgaattttccactttat
cgcgaatctattgggcgcaaagaggtgtgtgccgtgacggaaatccatcccgacggcagc
atgagcttcgatcgcccttggtgcttgggtgatgaagtgcagttctgttacaaccatcct
tcgttaacgcttgagcaagttcgccatggggtggtggagctttccatgcatcaacctgaa
gccgtgatgatttataactgcgcatcgcgacttgattttattgatagcagcgatgaagtt
cgtgccttcacggacatttctcacacgtcgggcagttactgcatgggcgagttgtacggc
gagaatcaccaacaagaaattctgcaccatagcctgacttatttggcgatgcgtgaaggg
gatgaagttgctgcgcttaacatgccacagcaagaagtgagcacttctatctctcccttg
tttagcctgatccgcaatgcgattggcgatctcaacaacatgaatgctcatatgggctat
caactcgatcgccaagcgaaaaagctagaacagagcttccgccgagatagccgcacagga
ttacaaaatcgcgttgcgttgcaagagcgtttgatcagcattgataccgatgagcattta
ctgacacttaaactgcttaactttagccatatcaacgaaaagtacggctatcgcgttggc
gaccaactgttgaaagacttgtcgatgcactttagcaatcgcctgcgtaaacgccttggt
aaaccggctgcgctacagctttatagcattggtgttggtgagtgggcgttcttattcaaa
gctgacaccagtagcgaagcgatcaagcaacactttactcgctttgctgacgcggtcgag
caaaccaactttgagccaagtggcttacgagacattgattacctttcgatttcgctgtgt
ggtggtttagtcagccgtcgtgattttccaactgcatcgccggatgaattgctcctcaaa
ggcattgaagcgcgaagagctggggtgcgaagtaatactcacatctgtaatgccaaagac
attgaggttaatgaagatgtgcggaaagagcagttgggttggttgagttgtgtgagccgc
gccattctcaagcagaacatcattacctacagtcagccaattgtgcacgcttacaaccat
cgtcccgcgagccaagagtgtttggtgcgcatcatggaagaggatggcagcatcattgcg
ccggggcgtttcttccccatcatttctgatacgcatttgtacacgcgcttgagtcgtcac
atgattcgctcaacactcaactacatgaaagaccagcatggtgacttctcaattaacttg
tcacctcaggatttactcagtgataaaaccttgatgttgcttgaacatgccattaccaaa
cttaacgacccaagacggattggtttggaagtgttggagtcagagcaaatcaaagattac
ggacgaatgattgaggtgtgcagtcactttagaagcctaggtgcacgcatcattgtggat
gattttggttcgggttactccaatattgatgagatcctcaagttagagccggaagtcatt
aagcttgatggcagtttgattcgctacatcgacaaagaccaaaagcagcgcaagattgct
tcgcagttggtgcgtttgtgtcaggtgtttaacgccaagaccgtcgctgagttcgtgcac
aacaaagaggtgtgtgacattgctcaggacatgggtgtggactatctgcaaggttattac
ttaggtgaaccgacacgtttgttttaa
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