Vibrio parahaemolyticus RIMD 2210633: VP0214
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Entry
VP0214 CDS
T00120
Name
(GenBank) ADP glyceromanno-heptose 6-epimerase GmhD
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00540
Lipopolysaccharide biosynthesis
vpa01100
Metabolic pathways
vpa01250
Biosynthesis of nucleotide sugars
Module
vpa_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VP0214
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vpa01005
]
VP0214
Enzymes [BR:
vpa01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
VP0214
Lipopolysaccharide biosynthesis proteins [BR:
vpa01005
]
Core region
VP0214
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
ThiF
Polysacc_synt_2
adh_short
NAD_binding_4
KR
Phage_T7_Capsid
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
BAC58477
UniProt:
Q87T56
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All DBs
Position
1:complement(224667..225608)
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AA seq
313 aa
AA seq
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MIIVTGGAGMIGSNIVKALNEAGINDILVVDNLKNGKKFKNLVDLDITDYMDRDDFLTQI
MAGDDFGPIEAIFHEGACSATTEWDGKYMMLNNYEYSKELLHYCLDREIPFLYASSAATY
GETETFVEEREYEGALNVYGYSKQQFDNYVRRLWKDAEEHGEQLSQITGFRYFNVYGPRE
DHKGSMASVAFHLNNQINAGENPKLFEGSGHFKRDFVYVGDVCKVNLWFLENGVSGIFNC
GTGRAESFEEVAKAVVKHHNKGEIQTIPFPDHLKGAYQEFTQADLTKLRAAGCDVEFKTV
AEGVAEYLTIQNS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgtaactggtggtgctggcatgatcggcagcaacattgttaaagcactgaac
gaagcaggtattaacgatattctggttgtcgacaacctaaaaaatggcaagaagtttaaa
aacttagttgatcttgatatcacagattacatggatcgtgatgacttccttactcaaatc
atggcaggtgacgacttcggccctatcgaagcaatcttccatgaaggtgcttgttctgcg
acaactgagtgggacggcaagtacatgatgctaaacaactatgagtactcaaaagagttg
cttcattactgtttagatcgtgaaattccattcctatacgcgtcatcagctgcgacatac
ggtgaaacagaaacattcgttgaagagcgtgaatatgaaggcgcactcaatgtatacggc
tactcgaaacagcaatttgataactatgttcgtcgcctatggaaagacgcagaggagcat
ggcgagcagctttctcaaatcactggtttccgatacttcaatgtatatgggccacgtgaa
gatcacaaaggcagcatggcatctgttgcgttccatctgaataaccagatcaatgctggt
gaaaaccctaagttatttgaaggtagtggtcactttaaacgtgatttcgtttacgttggt
gatgtgtgcaaagtaaacctttggttcctagaaaatggtgtttctggcatcttcaactgc
ggtactggtcgtgcagaatcttttgaagaagtggcaaaagcagtggtcaaacaccacaac
aaaggtgaaatccaaaccattccgttccctgatcacctaaaaggcgcttaccaagaattc
actcaagcggatctaactaagcttcgtgcagctggttgtgatgtagaattcaaaacggta
gctgaaggtgttgctgaatacttaactatccaaaacagttaa
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