Vibrio parahaemolyticus RIMD 2210633: VPA0801
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Entry
VPA0801 CDS
T00120
Name
(GenBank) glycine cleavage system P protein
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00260
Glycine, serine and threonine metabolism
vpa00630
Glyoxylate and dicarboxylate metabolism
vpa00785
Lipoic acid metabolism
vpa01100
Metabolic pathways
vpa01110
Biosynthesis of secondary metabolites
vpa01200
Carbon metabolism
Module
vpa_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VPA0801
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VPA0801
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
VPA0801
Enzymes [BR:
vpa01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
VPA0801
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
RNase_H2-Ydr279
Motif
Other DBs
NCBI-ProteinID:
BAC62144
UniProt:
Q87I05
LinkDB
All DBs
Position
2:complement(828140..831004)
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AA seq
954 aa
AA seq
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MTELLQSLSTQNEFVGRHNGPKLSDQQKMLEAINAVSLDALISETVPANIRLEQPMTLAE
AKSEADMLATMKQFAKQNQVKRTFIGQGYYNTFTPNVILRNVLENPGWYTAYTPYQPEIS
QGRLESLLNFQQMVIDLTGMEIANASLLDEATAAAEAMTLCKRAGKSKSNVFFVADDVHP
QTIEVVKTRAKFIGFEVLVGSLESLPEQDVFGALVQYPSTTGEVRDLTDIIAKAQANKTL
VTVATDLLACTLLKPAGEMGADVAIGSAQRFGVPMGYGGPHAAFMATRDKHKRTMPGRVI
GVSIDAKGNQALRMAMQTREQHIRREKATSNICTAQALLANMASFYAVYHGAEGLRTIAR
RTHHMTAILAAGLTKGGFELAHNSFFDTITINTGEKTQDLYTKALAADINLRVLPGKLGI
SLDETTTVADVEALFAIFGVKEDVTALSTEVAGNEFAAIPEALRRTSEYLTHPVFNTYHS
ETQMMRYLKQLENKDFSLTHGMIPLGSCTMKLNAAAEMIPITWPEFGSIHPFAPAEQAAG
YAALAKDLKEKLCEITGYDAFSLQPNSGASGEYAGLIAIQRYHESRGEGHRNVCLIPSSA
HGTNPATASMVSMKVVVVKCDDEGNIDIDDLAAKIEKHKDNLSSIMITYPSTHGVYEEKV
KEVCEMVHAAGGQVYLDGANMNAQVGLTSPGFIGSDVSHLNLHKTFCIPHGGGGPGMGPI
GVKSHLAPFLPGHIENGVEGEDFAVSAADFGSASILPISWAYIAMMGEAGLSNATKVAIL
NANYVMERLRPHYPVLYRGKNGRVAHECIIDIRPLKEETGISEEDIAKRLMDYGFHAPTM
SFPVAGTLMVEPTESEDLAELNRFCDAMISIREEMTKVKNGEWPLENNPLVNAPHTQVDL
SAEEWDRPYSRELGCFPSKATKSWKYWPTVNRVDNVYGDRNLICSCPSIDNYED
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgactgaattacttcaaagcctcagcacacaaaacgagttcgttggacgccacaacgga
ccaaaactttctgaccaacaaaaaatgttggaagcgatcaacgcagttagcctagacgca
ctgatcagcgaaaccgtaccagcaaacatccgccttgagcagccaatgacgttggcagaa
gcgaaaagcgaagcggacatgttggctacgatgaaacaattcgcaaaacaaaaccaagtc
aaacgtacattcatcggtcagggttactacaacacgttcacgccaaatgtcattctgcgt
aacgtactagaaaacccaggctggtacaccgcgtacacaccataccaaccagaaatttct
caaggccgtctggaatcactactgaacttccaacaaatggttatcgacctaaccggtatg
gaaatcgcaaacgcgtctttgcttgatgaagcaacggcagcggcagaagcgatgacactt
tgtaagcgcgcaggtaagagcaagagcaacgtattctttgtggctgacgatgtgcaccca
caaaccatcgaagtggtaaaaacgcgtgcaaaattcatcggttttgaagtgctagttggt
tctttagaatctctaccagagcaagacgtattcggcgcgctggttcaatacccaagcaca
acgggtgaagttcgtgacctaacggacatcatcgcgaaggcacaagcaaacaaaaccctt
gtcactgttgcgactgacctacttgcttgtaccctattgaagcctgctggagaaatgggc
gcagacgtcgcaattggttcagctcagcgtttcggcgtaccaatgggttacggcggtcca
cacgcggcattcatggcaactcgtgacaaacacaaacgtacaatgccaggccgtgttatc
ggtgtttcaatcgatgcaaaaggcaaccaagcacttcgtatggcaatgcaaactcgcgag
cagcacatccgccgcgaaaaagcgacatcaaacatctgtaccgctcaagcgttactagca
aacatggcctctttctacgcggtttaccacggtgctgaaggtctacgcaccattgctcgt
cgcacgcaccacatgactgccatccttgctgctggcctaacaaaaggcggctttgaactg
gctcataacagcttcttcgacaccatcaccatcaacactggtgagaaaacgcaagatctg
tacacaaaagcactcgcagcagacatcaacctacgcgtcctacctggcaaactaggcatt
agcttagatgaaacaacaaccgttgcagatgtcgaagctttgtttgctatctttggcgta
aaagaagacgttaccgcactatctacggaagtcgctggtaacgagtttgccgccattcca
gaagcgctacgtcgtacttcagaatacctaacgcacccagtgttcaacacttaccacagt
gaaacacaaatgatgcgttacctaaaacagcttgaaaacaaagacttctcgctaacgcac
ggcatgatcccactaggcagctgtacgatgaagctaaacgcagctgcagagatgatccca
atcacttggcctgagtttggttctatccacccatttgcaccagcagaacaagcggcgggc
tatgcagcgctagcgaaagatctaaaagagaagctttgtgaaattacaggctacgacgca
ttctcactacagccaaactctggcgcatcgggcgagtatgcaggtcttatcgcgattcaa
cgctaccacgaaagccgtggcgaaggtcaccgcaacgtatgtttgatcccaagctctgcg
cacggtactaaccctgcaaccgcatctatggtgtcaatgaaagttgtggttgttaagtgt
gatgacgaaggcaacatcgacatcgacgacctagcagcgaaaatcgagaagcacaaagac
aacctatccagcatcatgatcacttacccttctacgcacggcgtttacgaagagaaagtg
aaagaagtgtgtgaaatggttcatgcagcaggcggtcaagtatacctagacggcgcgaac
atgaacgcacaggttggtctaacgtcccctggctttatcggctcagacgtttctcaccta
aacctacacaaaaccttctgtatccctcacggtggcggcggtccaggtatgggtcctatc
ggcgttaaatcgcacctagcacctttcctaccaggtcacatcgagaacggtgtagaaggc
gaagacttcgcagtatcagctgcagattttggtagtgcatctatcctacctatctcttgg
gcttacatcgcaatgatgggtgaagcaggcttatccaacgcaaccaaggtcgcgattcta
aacgctaactatgtgatggaacgtctacgccctcactaccctgttctttaccgtggtaaa
aacggccgcgtagcgcacgaatgtattatcgacatccgtccgctgaaagaagaaacaggc
attagcgaagaagatatcgccaagcgtctaatggactacggtttccacgcgccaaccatg
tcgttcccagttgctggcacgctaatggttgaaccaacggaatctgaagacctagcagag
ctaaaccgcttctgtgatgcgatgatttctattcgtgaagaaatgacgaaagtgaaaaat
ggtgaatggccactagagaacaaccctctcgttaatgcgccacacacgcaagttgacctt
tctgctgaagaatgggatcgcccatactcacgcgaacttggctgcttcccatcaaaagca
accaaatcttggaaatactggcctacagtaaaccgcgtagataacgtatacggcgaccgt
aacctaatctgctcgtgcccaagcatcgataactacgaagactaa
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