Vibrio parahaemolyticus RIMD 2210633: VPA1192
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Entry
VPA1192 CDS
T00120
Name
(GenBank) putative deoxycytidylate deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
vpa
Vibrio parahaemolyticus RIMD 2210633
Pathway
vpa00240
Pyrimidine metabolism
vpa01100
Metabolic pathways
vpa01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
vpa00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
VPA1192
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vpa02044
]
VPA1192
Enzymes [BR:
vpa01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
VPA1192
Secretion system [BR:
vpa02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
VPA1192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
APOBEC3
HVO_2753_ZBP
Motif
Other DBs
NCBI-ProteinID:
BAC62535
UniProt:
Q87GX3
LinkDB
All DBs
Position
2:1264867..1265331
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AA seq
154 aa
AA seq
DB search
MISKWAKRFYQMAELVASWSKDPSTQVGAVITNQNRIVSVGFNGYPHGVSDSVDTDEREL
KYLKTLHAEENAILFSKRDLDGCDIWVTHFPCPNCAAKIIQTGISRVHCPEQSEDFLSRW
GDKIQVSQDMFDQAGVEVDWLPLDDINFEDKDVR
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atgatttctaaatgggcgaaacgtttttaccaaatggctgaactggtggcgtcttggagt
aaagacccttcaacgcaggtaggtgcggtgatcactaaccagaaccgcattgtttctgtt
ggctttaacggttatccacacggtgtttcggacagcgtagacaccgacgaacgtgaactg
aaatacttaaaaactctgcatgcagaagagaacgcaattctcttttcaaaacgcgatttg
gatggttgtgacatttgggtaacgcacttcccatgcccgaattgcgcggcaaagatcatt
caaacaggcatttcgcgcgttcactgcccagaacagtctgaagactttctatctcgctgg
ggagataaaatccaagtgagccaagatatgtttgatcaggcgggtgttgaggtagattgg
ctaccgctagacgacatcaatttcgaggataaagacgttcgttag
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