Vibrio parahaemolyticus BB22OP: VPBB_0222
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Entry
VPBB_0222 CDS
T02409
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Pathway
vpb00540
Lipopolysaccharide biosynthesis
vpb01100
Metabolic pathways
vpb01250
Biosynthesis of nucleotide sugars
Module
vpb_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VPBB_0222
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vpb01005
]
VPBB_0222
Enzymes [BR:
vpb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
VPBB_0222
Lipopolysaccharide biosynthesis proteins [BR:
vpb01005
]
Core region
VPBB_0222
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
ThiF
adh_short
KR
Phage_T7_Capsid
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
AGB08746
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Position
1:complement(237614..238555)
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AA seq
313 aa
AA seq
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MIIVTGGAGMIGSNIVKALNEAGINDILVVDNLKNGKKFKNLVDLDITDYMDRDDFLTQI
MAGDDFGPIEAIFHEGACSATTEWDGKYMMLNNYEYSKELLHYCLDREIPFLYASSAATY
GDTDTFVEEREYEGALNVYGYSKQQFDNYVRRLWQDAEEHGETLSQITGFRYFNVYGPRE
DHKGSMASVAFHLNNQLNAGENPKLFAGSESFKRDFVYVGDVCKVNLWFLENGVSGIFNC
GTGRAESFEEVAKAVITHHGKGEIETIPFPEHLKGAYQEFTQADLTKLRAAGCDVEFKTV
AEGVAEYLTIQNS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgtaactggtggcgctggcatgatcggcagcaacattgttaaagcactaaac
gaagctggtattaacgatatcttggttgtcgacaacctaaaaaatggcaaaaagtttaag
aacttagttgatctggacatcacagattacatggatcgtgacgactttctgacccaaatt
atggcgggcgatgattttggtccgattgaggcaattttccacgaaggcgcttgctctgca
acgacagagtgggatggtaaatacatgatgctaaacaattacgagtactctaaagagctg
cttcattactgtttagatcgtgaaattccattcctatacgcctcttccgcagccacttac
ggcgatacagatactttcgttgaagaacgcgaatacgaaggcgcactaaatgtatacggt
tactcgaaacagcagtttgataactacgttcgtcgtctatggcaagacgctgaagaacat
ggtgagaccctttctcaaatcaccggcttccgttacttcaacgtatatggcccacgtgaa
gatcacaaaggcagcatggcatctgttgcgttccatctgaacaaccaactaaacgcaggt
gaaaatccaaaactgtttgcaggtagcgagtcttttaagcgtgatttcgtttacgttggt
gatgtatgtaaagtaaacctgtggttccttgaaaatggtgtttctggcatcttcaactgt
ggtactggtcgtgcagaatcttttgaagaagtagcaaaagcggtcattacccatcatgga
aaaggcgagattgaaactattcctttcccagaacatctaaaaggtgcctatcaagagttc
acgcaagcagaccttaccaagctacgcgctgccggttgcgatgttgagttcaagacggtt
gcagaaggcgttgccgaatacttaactatccaaaacagttaa
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