Vibrio parahaemolyticus BB22OP: VPBB_0662
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Entry
VPBB_0662 CDS
T02409
Name
(GenBank) tRNA S(4)U 4-thiouridine synthase (former ThiI)
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Pathway
vpb00730
Thiamine metabolism
vpb01100
Metabolic pathways
vpb01240
Biosynthesis of cofactors
vpb04122
Sulfur relay system
Module
vpb_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
VPBB_0662
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
VPBB_0662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpb03016
]
VPBB_0662
Enzymes [BR:
vpb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
VPBB_0662
Transfer RNA biogenesis [BR:
vpb03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
VPBB_0662
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
Transcrip_reg
Dak2
Motif
Other DBs
NCBI-ProteinID:
AGB09173
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All DBs
Position
1:721112..722509
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AA seq
465 aa
AA seq
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MRKRFTKILECNIRNIVKSRTESVAVFNRRDHIEVTSESNEYHAEVLEILTHTPGIHHVL
EVKQSEFKDLHDIYEQVLELSRPLIENKTFVVRAKRRGKHDFTSIELERYVGGGLNQAVE
SARVKLHNPDVTVKVEVSGDKLNQVLARYKGLGGFPLGTQEDVLSLISGGFDSGVSSYLH
IKRGSKVHYCFFNLGGPAHEIGVKQVSHYLWNKYGSSAKVRFISVDFEPVVAEILEKVDD
GQMGVILKRMFMRAAGMIAEKFKIEALVTGEALGQVSSQTLTNLRHIDNVTDTLILRPLI
NWDKEDIINLAREIGTEDFAKTMPEYCGVISKKPTVKAVKEKLEAEEAKFDFSILEKVVY
EARQMDIRDIAKESEQAAPEVEQVQAVEEHAVVLDIRSPDEEDDNPLEIAGVDVKHIPFY
KLGTQFGDLDQSKTYLLYCDRGVMSRLQALYLQEQGFNNVKVYRP
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtaagcgcttcacaaagattttagagtgcaacattcgtaatatcgtcaagagccgc
acggaatctgtcgcagtatttaaccgtcgtgatcacattgaagtgacctctgagagcaac
gaataccacgctgaagttttagaaatcctgactcacacgccaggcattcatcacgttcta
gaagtgaagcaatctgagtttaaagacctgcacgacatctacgagcaggtgctggaactt
agccgtccgcttattgaaaataaaacgtttgtggttcgtgcaaaacgccgtggtaagcat
gacttcacgtctatcgagcttgaacgttacgttggtggtggtttaaaccaagcagtagaa
agcgcacgcgttaaattacacaaccctgatgtgacggtaaaagttgaagtgtcgggtgac
aaacttaaccaagtgttggcacgttacaaaggtctaggtggcttccctctaggtactcaa
gaagacgtactaagcctgatctcaggtggtttcgactctggtgtatcaagctacctacac
atcaaacgtggctctaaagttcactactgtttctttaacctaggtggccctgctcatgaa
atcggcgttaagcaggtttctcactacctatggaacaaatacggctcatcagcgaaagtg
cgtttcatctctgttgatttcgaacctgtggttgctgaaattcttgagaaagtagatgac
ggtcaaatgggcgtcatcttgaagcgtatgttcatgcgcgctgctggcatgattgctgag
aagtttaagattgaagcgttggtaacgggtgaagctcttggccaggtatctagccaaacg
ctaacgaaccttcgtcacatcgataatgttacggatacgctgattctgcgtcctcttatc
aactgggataaagaagacatcatcaacttagctcgtgaaatcggtacagaagactttgca
aaaaccatgcctgagtactgtggcgtgatctctaagaagccaacagtaaaagcggtgaaa
gagaagctagaagcagaagaagcgaagtttgacttcagcattctagagaaagtggtttac
gaagcgcgtcaaatggacattcgtgatatcgcaaaagaatctgagcaagcggcaccagaa
gttgagcaagtacaagcagtagaagaacacgcagtggtactggatattcgtagccctgat
gaggaagacgataacccactagaaatcgctggtgtggatgtgaaacacattccgttctac
aagctgggtacgcagttcggtgacctagaccagtcgaaaacttacctactgtactgtgac
cgtggcgtaatgagccgtctgcaagcgctttacttgcaagagcaaggctttaacaacgtg
aaagtttaccgtccatag
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