Vicugna pacos (alpaca): 102535453
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Entry
102535453 CDS
T08098
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04721
Synaptic vesicle cycle
vpc04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
102535453 (SLC6A4)
04721 Synaptic vesicle cycle
102535453 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpc02000
]
102535453 (SLC6A4)
Transporters [BR:
vpc02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
102535453 (SLC6A4)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
102535453
NCBI-ProteinID:
XP_031541222
UniProt:
A0A6J3B7H6
LinkDB
All DBs
Position
16
AA seq
630 aa
AA seq
DB search
METTPLTSQKELSACKDGEDCQENGVLQKSVSAPGDKVESGQISNGYSAVPSPGAGDDTQ
HSIPAATTTLVAEGHPGERETWGKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIM
AWALYYLISSFTDQLPWTSCENSWNTGNCTNYFSEDNITWTLHSTSPAEEFYTRHVLQIH
RSKGLQDLGGISWQLALCIMLIFTIIYFSIWKGVKTSGKVVWVTATFPYIILSILLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSAVNCLTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPQLWSKRREWFVLGVVITCFFGSLIT
LTFGGAYVVKLLEEFATGPAVLTVALIEAVAVYWFYGITQFCSDVKEMLGFSPGWFWRIC
WVAVSPLFLLFIICSFLLSPPQLRLFQYNYPQWSIILGYCIGTSSFICIPTYITYRLIIT
PGTLKERIIKGITPETPTEIPCGDIRLNAV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacacccctaacttcccagaaggagctgtcagcgtgtaaggatggagaagat
tgtcaggaaaacggagttctgcagaaaagtgtctctgcccctggggataaggtggagtcc
ggccaaatctccaacgggtactcagcagttccgagcccaggtgcaggagacgacactcag
cactccatcccagctgccaccaccaccctagtggctgagggtcatccaggggaacgggag
acctggggcaagaagatggatttcctcctctcagtcattggctacgccgtggacctgggc
aacgtctggcggtttccctacatctgttaccagaatggagggggggcgttcctcctcccc
tacactatcatggccatcttcggagggatcccactcttctacatggagctcgcgctgggt
cagtaccaccgcaatggatgcatttcgatatggaggaaaatctgcccaattttcaaaggg
atcggttacgccatctgcatcattgccttttacatcgcctcctactacaacaccatcatg
gcctgggcgctctactacctcatctcctctttcacggaccagttgccctggaccagctgc
gagaactcctggaacactggcaactgtaccaactacttctccgaggacaacatcacctgg
acactccactcaacgtccccggcagaagaattttacacgcgccatgtcctacagatccac
cggtctaagggactgcaggacctggggggcataagctggcagcttgccctctgcatcatg
ctgatcttcactattatctactttagcatctggaaaggcgtcaaaacgtctggcaaggtg
gtttgggtgacagctaccttcccttacatcatcctttccatcctgctggtgaggggggcc
accctccccggagcctggaggggagttctcttctacttgaaacccaactggcagaagctc
ctggagacaggggtgtgggtggatgcggccgctcagatcttcttctctctcggtcctggt
tttggggtcctactggcttttgctagctacaacaaattcaacaacaactgttaccaagat
gccctggtgaccagtgcggtgaactgcctgacgagcttcgtttccggatttgtcatcttc
acagtgcttgggtatatggctgagatgaggaatgaagatgtgtccgaggtggccaaagat
gcaggccccagcctcctcttcatcacatatgcagaagccatagccaacatgccggcatcc
acgttctttgccatcatcttcttcctgatgttaatcacactgggcttggacagcacgttt
gcaggcttggagggagtgatcacggccgtgctggatgagtttccacaactgtggtccaag
cgccgggagtggtttgtgcttggcgtggtcattacctgcttctttggatccctgatcacc
ctgacttttggaggggcctatgtggtgaagctgctggaggagtttgccacgggacccgca
gtgctcaccgttgccctgatagaagcagttgctgtgtattggttctacggcatcactcag
ttctgcagtgatgtgaaggaaatgctcggcttcagccccggatggttttggaggatctgc
tgggtagctgtcagccctctgtttctcctgttcatcatttgcagttttttgctgagccca
ccacagctacgacttttccaatataactatcctcaatggagtatcatcctgggttactgc
ataggaacctcatctttcatctgtatccctacatacataacttaccggctgatcattacc
ccagggacacttaaggagcgtattattaagggtatcacgccagaaacacctacagaaatt
ccctgtggagacatccgcttgaatgctgtgtaa
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