Vicugna pacos (alpaca): 102537169
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Entry
102537169 CDS
T08098
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1 isoform X2
KO
K06527
vascular cell adhesion molecule 1
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc04064
NF-kappa B signaling pathway
vpc04514
Cell adhesion molecules
vpc04668
TNF signaling pathway
vpc04670
Leukocyte transendothelial migration
vpc04933
AGE-RAGE signaling pathway in diabetic complications
vpc05143
African trypanosomiasis
vpc05144
Malaria
vpc05417
Lipid and atherosclerosis
vpc05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
102537169 (VCAM1)
04668 TNF signaling pathway
102537169 (VCAM1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102537169 (VCAM1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
102537169 (VCAM1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
102537169 (VCAM1)
05143 African trypanosomiasis
102537169 (VCAM1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
102537169 (VCAM1)
05418 Fluid shear stress and atherosclerosis
102537169 (VCAM1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
102537169 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
vpc04090
]
102537169 (VCAM1)
04091 Lectins [BR:
vpc04091
]
102537169 (VCAM1)
CD molecules [BR:
vpc04090
]
Proteins
102537169 (VCAM1)
Lectins [BR:
vpc04091
]
I-type lectins (Siglecs)
102537169 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
C2-set
Ig_2
V-set
ICAM_N
Ig_5
Ig_4
Ig_6
ICAM1_3_5_D2
C2-set_2
Izumo-Ig
C1-set
Receptor_2B4
TrkA_C
Motif
Other DBs
NCBI-GeneID:
102537169
NCBI-ProteinID:
XP_006197430
UniProt:
A0A6I9HYT1
LinkDB
All DBs
Position
9
AA seq
733 aa
AA seq
DB search
MPRKMVVNFAASSILWMVFTASQAFKIETSPASKIIAQLGDSVSMTCSTTHCESPAFSWA
ALMDRPLNGKVINEGNKSTLVTNPVNLENDYSYLCFVTCESKKRRREFSVEIYSFPKDPE
IRFSGHPELGKPITVTCFVPDVYPSDKLKIELLKGNQFLSQKEFLDPADIKSQETKSLEA
TFTPADEDNGTALVCRATLNVYEIDSEPQVRETTEQLHIYVSPKDTVISVSPSTRLQEGD
SVTMTCSSRGLPAPQIFWRKKLDNGDLQLLSENATLTLIAMRMEDSGTYVCEGVNKVGQD
REEVTLIVQKKMFTVEISPGPWVAAQIGDLVMLTCIVTGCESPSFSWRTQLDSPLSGNVT
TEGSKSTLTLSPVSLEHEHSYQCAVTCGHEKELERKTQVKLYLFPRNLEIEMSGLFVSGK
PVTVSCKVPDVYSFDRLEIELLKGESIMKNKTFLRNVDTKSLETKSLEMTFIPTTEDTGK
VLVCQAKLSIDEMEFELKQEQNTQTLYVNVAPQVTAILVSPSSVLEEGRSVNMTCSSDGL
PAPKTLWSKQLNNGDLQPLSENTTLTLMSTKMEDSGIYVCEGINQAGISRKEVELIIQVA
PKDTQLTAFPSESVREGDTVIISCTCGNAPQTLIILKKKAETGDTLLKSTDGAYTIHKAQ
LQDAGVYECESKNEVGFQLRSITLNVKERESSKDYFSPELLVLYCASSLVIPATGMIIYF
ARRANMRGSYSLV
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcctaggaagatggtcgtgaactttgcagcctcaagtatactttggatggtgtttaca
gcttctcaagcttttaaaattgagacgtcccctgcctccaaaattattgctcagcttggt
gactccgtttcaatgacttgcagcacaacacactgtgagtccccagctttctcgtgggca
gctctcatggacaggccactgaatgggaaggtgataaatgaagggaacaaatccacgctg
gtcacgaatcctgttaatttggagaatgactactcttatttgtgcttcgtgacttgtgag
tcgaagaaacgtcgaagagaattctcagtggagatctattctttccctaaggacccagag
attcgtttcagtggccatccagagcttgggaagccgatcactgtcacgtgttttgtccct
gatgtttacccgtctgataagctgaagatagaattactgaagggcaaccagttcctgagt
cagaaggaatttctggaccctgcggatataaagtcccaggaaacgaagagtttggaagca
acctttactcctgctgacgaggataacgggacagctcttgtttgtcgagctacattaaac
gtttatgaaattgattctgagcctcaagtaagggagactacggaacaactgcacatctac
gtctcgcccaaggacacggttatatctgtgagtccctccacaaggctgcaagaaggtgat
tccgtgacgatgacgtgctccagtagaggtctaccagcgccacagattttctggagaaag
aaattagacaatggggatctacagctcctttctgagaatgcaacgctcactttaattgct
atgaggatggaagattctggaacttatgtgtgtgaaggagttaataaggttgggcaagac
agagaagaggtgacattaattgttcaaaagaaaatgtttactgtagagatctctcctgga
ccctgggtcgctgctcagattggtgacttggtcatgttgacatgtattgtcacgggctgt
gagtccccatctttctcttggagaacccagctagacagccccctgagtgggaatgtgacc
actgaaggatccaaatccacgctgaccctgagccctgtgagtcttgagcatgaacattct
taccagtgtgccgtgacatgtgggcatgaaaaggaactggaaaggaaaacccaagtgaag
ctctacttattccctagaaacctagaaattgagatgagtggtctgttcgtgagtggaaag
cccgtcactgtaagctgcaaagttcctgatgtatattcttttgatcgactagaaattgaa
ttgcttaagggggagagtattatgaagaataagacctttttgagaaatgtagatacaaaa
tccctagagacgaagagtttggaaatgaccttcatcccaaccactgaagatactggaaaa
gttcttgtttgtcaggcgaagttatctattgatgaaatggaattcgaactcaaacaagag
cagaatacacagacactttatgttaatgttgctccccaggttacagccatcttggtcagc
ccctcctccgtcctggaggaaggccgttctgtgaacatgacatgctctagcgatggcctt
ccagctccaaaaaccctgtggagcaagcagctaaataatggggatctccagcctctttct
gagaatacaactctcaccttaatgtccacaaaaatggaagattctggtatttatgtgtgt
gaaggaattaaccaggctggaataagcagaaaagaagttgaattaattatccaagttgct
ccaaaagatacacaacttacagcttttccttctgagagcgtcagggaaggagacacggtc
attatctcttgtacgtgtggaaatgctccccagactttgataatcctgaagaaaaaagca
gagactggtgacacactgctaaagtctacagatggtgcatataccattcacaaggcccag
ttacaggatgcgggagtatatgagtgtgaatctaaaaatgaagttggctttcagttaaga
agtataacgcttaatgttaaagaaagagaaagtagcaaggactatttttctccggaactt
ctcgtgctctattgtgcatcctccttagtgatacctgccactggaatgattatttacttt
gccagaagagcgaacatgagagggtcatacagccttgtataa
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