Vicugna pacos (alpaca): 102543057
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Entry
102543057 CDS
T08098
Symbol
POLR3B
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2 isoform X1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03020
RNA polymerase
vpc04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
102543057 (POLR3B)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
102543057 (POLR3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpc03021
]
102543057 (POLR3B)
Enzymes [BR:
vpc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
102543057 (POLR3B)
Transcription machinery [BR:
vpc03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
102543057 (POLR3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
102543057
NCBI-ProteinID:
XP_006205934
UniProt:
A0A6I9I9C2
LinkDB
All DBs
Position
12
AA seq
1133 aa
AA seq
DB search
MDVLVEEFGNLTPEQLAAPIPTVEEKWRLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKVTSDADPMWYLKYLNIYVGLPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILI
QEQLSKNRIIVEADRKGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIF
KAMGVESDQEIVQMIGTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWGGG
PKKTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNKVDDRDYYGNK
RLELAGQLLSLLFEDLFKKFNSEMKKIADQVIPKQRAAQFDVVKHMRQDQITNGMVNAIS
TGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLC
PSDTPEGEACGLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVF
LNGNILGVIRDHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVK
KQKPAVTNKHMEELAQGYRNFEDFLHESLVEYLDVNEENDCNIALYEHTINKDTTHLEIE
PFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQKPMV
KTKTIELIEFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLK
RYTNQTFDKVMGPMLDAATRKPIWRHEILDADGICSPGEKVENKQVLVNKSMPTVTQIPL
EGSNVPQQPQYKDVPITYKGATDSYIEKVMISSNAEDAFLIKMLLRQTRRPEIGDKFSSR
HGQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGFPSRMTVGKLIELLAGKAGVLDGRFHY
GTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKM
HARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVC
GQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLSKYNE
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggacgtacttgtggaggagtttgggaacctgaccccagagcagctcgctgcgcccatc
ccgactgtagaggaaaaatggcggctgcttccagcatttttaaaggtgaaaggccttgtg
aaacagcatatagattcatttaactatttcattaatgtagagataaagaaaataatgaaa
gccaatgaaaaggttacgagtgatgctgaccccatgtggtacttaaagtatcttaatatc
tatgtcgggcttcctgacgttgaagaaagcttcaatgtaactagaccggtgtcccctcat
gagtgccgtctgcgggacatgacgtactctgcccccatcacggtggacattgaatatacc
cgaggcagccagaggatcatccgcaatgccttacccattggcagaatgcccataatgcta
cgtagctcaaactgtgttcttacaggaaaaacaccagcagaatttgcgaaactgaatgaa
tgtcctttagatccaggtggctatttcattgttaaaggagtagaaaaagttattcttatc
caagagcagctgtccaagaacaggatcatcgtggaggctgacagaaaaggggctgtgggt
gcttcagttaccagttctacccatgagaaaaaaagcagaaccaatatggctgtgaaacaa
ggacgattttatttgaggcataatactttgtcagaagatatacccattgtcattatattt
aaggccatgggtgttgagagtgaccaggaaattgtgcagatgattggaacagaggagcac
gtgatggctgcatttgggcccagtctggaagagtgccagaaagctcagattttcacacag
atgcaggcattaaaatatatagggaacaaagtaagaaggcaaaggatgtggggaggtgga
ccaaagaaaaccaaaatagaagaagcaagagagctcctggcttctaccattctgacccat
gtaccggttaaagaattcaatttccgagccaaatgtatctatactgcagtgatggtgcga
agagtaattctggcccaaggagataataaagttgatgacagagattattacggtaacaag
cgattggagttggcaggacagcttttatctcttctttttgaagatttgttcaaaaaattt
aattctgaaatgaaaaagattgcagaccaggtgattcctaagcaaagagcagcccaattt
gatgttgtgaaacacatgcgtcaagatcagattaccaacggcatggtgaacgccatttca
accggaaactggtctctaaagagatttaaaatggaccggcaaggtgtgactcaggtgctg
tctcgcctgtcatatatatctgcgctgggcatgatgacaagaatctcttcccagtttgag
aaaacaagaaaagtgagtggtcctcgatccctccagccatctcagtggggaatgctctgc
ccttcagacactcctgaaggagaggcatgtggtttggttaaaaacttggctcttatgaca
cacatcacaactgacatggaagatggacccattgtcaaattagccagtaacttgggagta
gaagatgtgaatttattatgtggggaagagctttcttacccaaatgtgtttcttgtcttc
cttaatggtaacattcttggtgtcattcgagaccacaagaagctggtgaatacatttcga
ctgatgcgaagagcaggatatatcaatgaatttgtttccatctcaacaaatctgacagac
cggtgtgtctatatttcctctgatggcggaaggctgtgcagaccctacataattgttaag
aaacagaaacctgcagttacaaataagcatatggaagaactggctcaggggtacagaaac
tttgaagatttcttacatgagagtctggttgaatatttagatgtaaatgaagaaaatgat
tgtaacatcgcactctatgaacatacaattaataaagatactacccacttggagattgaa
cccttcactcttcttggcgtttgtgctggcctgatcccataccctcatcataaccagtcc
ccaagaaacacgtatcagtgtgccatggggaaacaagccatgggtaccattggatacaac
cagcggaacagaattgatactctaatgtatctcctagcatatccacaaaaacccatggtt
aaaacaaagaccattgagttgatagaatttgagaaattgccagctggacagaatgcaaca
gtggctgtgatgagttacagtggctatgatatcgaagatgctcttgttttaaacaaggct
tccctggatagaggctttggacgttgccttgtgtataaaaatgctaaatgtacattgaaa
cgatataccaatcagacttttgataaagtgatggggccaatgctggatgctgctacaagg
aaacccatctggcgacatgagattttagatgcagatggtatttgttctccaggtgagaaa
gtagaaaacaaacaagtgcttgtgaataagtccatgcccacagtgactcagattcctttg
gaggggagcaatgtgccacagcagccacagtacaaagatgtgcccatcacctacaaaggg
gcaacggattcatatattgaaaaagtgatgatatcttcaaatgccgaagatgcttttctg
atcaaaatgctgctgagacagacaaggcgtccagagattggagacaaattcagcagtcgt
catgggcaaaaaggtgtttgtggcttgatcgtccctcaagaagacatgccattttgtgat
tctggcatttgtccggacatcataatgaatccacacggcttcccatctcgaatgacggtg
gggaagttaattgaactgttggcgggcaaggccggcgtgttagatggcaggttccactat
ggcactgcatttggaggcagtaaagtgaaggatgtgtgtgaagaccttgttcgccacggt
tataactacttggggaaagactatgtcacatctggcatcacaggggagcccttagaagca
tacatctattttggccccgtgtactatcagaaactgaaacacatggtgctagataagatg
cacgcccgggcccggggaccacgagctgtccttaccaggcaacccactgaaggtcgatct
cgtgatggtggtttgcgtcttggagaaatggaacgtgactgtttaatcggttatggagcc
agtatgcttttgctagagagactaatgatttcaagtgatgcctttgaggttgatgtctgt
gggcagtgcggacttctggggtactctggctggtgccattactgcaagtcgtcatgccat
gtgtcttccctccgcattccgtatgcctgcaagctgctcttccaggagctgcagtcaatg
aacattatccccaggttaaaactgtccaagtacaatgaataa
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integrated database retrieval system
