Vicugna pacos (alpaca): 102545970
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Entry
102545970 CDS
T08098
Symbol
POLD1
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
vpc
Vicugna pacos (alpaca)
Pathway
vpc03030
DNA replication
vpc03410
Base excision repair
vpc03420
Nucleotide excision repair
vpc03430
Mismatch repair
vpc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102545970 (POLD1)
03410 Base excision repair
102545970 (POLD1)
03420 Nucleotide excision repair
102545970 (POLD1)
03430 Mismatch repair
102545970 (POLD1)
03440 Homologous recombination
102545970 (POLD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpc03032
]
102545970 (POLD1)
03400 DNA repair and recombination proteins [BR:
vpc03400
]
102545970 (POLD1)
Enzymes [BR:
vpc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
102545970 (POLD1)
DNA replication proteins [BR:
vpc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
102545970 (POLD1)
DNA repair and recombination proteins [BR:
vpc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
102545970 (POLD1)
MMR (mismatch excision repair)
DNA polymerase delta complex
102545970 (POLD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
102545970
NCBI-ProteinID:
XP_006208466
UniProt:
A0A6I9IEE7
LinkDB
All DBs
Position
11
AA seq
1107 aa
AA seq
DB search
MEGKRRPGPGPGCPPKRARGSLWDEDEAYRPSQFEEELALMEEMEAEHRLQEQEEEELQS
ALEGTVDGQFSSTAIDARWLRPSPPPLDPQTEPLIFQQLEIDHYVGPARPLPWGPPPSQG
SVPVLRAFGVTDEGISVCCHIHGFAPYFYTPAPPGFGPEHLGDLQRELNGAISRDQRGGK
ELTGPAVLAVELCTRESMFGYHGHGPSLFLRITLALPRLVAPARRLLEQGIRVAGLGTPS
FAPYEANVDFEIRFMVDTDIVGCNWLELPTGKYVLRPEGKATLCQLEADVLWSDVVSHPP
EGQWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPC
APILGAKVQSYEREEDLLQAWSSFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVPAFPF
LGRVSGLRSTIRDSSFQSKQTGRRDSKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFH
FLGEQKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAFLPLRLLERLMVLVNAMEMARVTG
VPLSYLLSRGQQVKVVSQLLRQAMREGLLMPVVKTEGGEDYTGATVIEPLKGYYDVPITT
LDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTEDQFIKTPTGDEFVKTSVRKGLLPQIL
ENLLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSV
TGFGRQMIEKTKQLVESKYTVENGYSANAKVVYGDTDSVMCRFGVSSVAEAMALGREAAD
WVSGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAHDRMDCKGLEAVRRDNCPLV
ANLVTASLRRLLIDRDPAGAVAHAQDVISDLLCNRIDISQLVITKELTRAAADYAGKQAH
VELAERMRKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQ
QLAKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKVGGLLAFAKRRNCCIGCRAVLS
HQGAVCKFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFY
MRKKVRKDLEDQEQLLRRFGPPGPEAW
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggagggtaagcggcgaccaggtccagggccggggtgccccccaaagcgggcccgtggg
agcctctgggacgaggatgaggcctaccggccatcacagttcgaggaggagctggcgctg
atggaggagatggaggcggagcacaggctgcaggagcaggaggaggaggagctgcagtcg
gccctggaggggactgtggacgggcagttctcctcgacagccatagatgcccgctggctt
cggccctccccgcccccactggacccccagacagagcccctcatcttccagcagctggag
attgaccattacgtaggcccagcacggcccctgccttggggacccccaccatcccagggc
tctgtgcctgtgctccgagccttcggggtcaccgacgagggcatctcggtctgctgccac
atccatggctttgcgccctacttctacaccccggcgccccctggtttcgggcctgagcac
ctgggcgacctgcagagggagctgaacggggccatcagccgggaccagcgcggtgggaag
gagctcacgggcccggccgtgctggccgtggagctatgcacccgggagagcatgtttggg
taccatgggcacggtccctccctgtttctgcgcatcaccctggcgctgccccgcctcgtg
gcccccgcccgccgcctcctggagcagggcatccgtgtggcaggcctgggcacccctagc
ttcgcgccctacgaggccaacgttgactttgagatccgattcatggtggacacagacatc
gttggctgcaactggctggaactcccgaccggaaaatatgtcctgcggccggaagggaag
gccacactgtgccagctggaggcagatgtgctgtggtcggacgtggtcagtcacccgcca
gaagggcagtggcagcgaattgcacccctgcgtgtgctcagctttgacatcgagtgcgct
ggccgcaaaggcatctttcctgagcctgagcgggaccccgtgatccagatctgctcgctg
ggcctgcgctggggtgaaccagagcccttcctgcgcctggcactcaccctgcggccctgc
gcccctatcctgggtgccaaggtgcagagctacgagcgggaggaggacctgcttcaggcc
tggtcgtccttcatccggatcatggaccccgatgtgatcaccggctacaacatccagaac
ttcgaccttccgtacctcatctcccgggcccagaccctaaaggtgccggcctttcccttc
ctgggccgcgtgtccggtctccgctccaccatccgggactcatccttccagtcgaagcag
accggccggcgggacagcaaggtggtcagcatggtgggccgcgtgcagatggacatgctg
caggtgctgctgcgggagtacaagctccggtcctacacgctcaatgccgtgagcttccac
ttcctgggcgagcagaaggaggatgtgcagcacagtatcatcaccgacctgcagaacggg
aacgaccagacgcgccgccgcctggccgtgtactgcctcaaggacgccttcctgccgctg
cggctgctggagcggctcatggtgctggtgaacgccatggagatggcgcgggtcaccggc
gtgcccctcagctacctgctcagccgaggccagcaggtcaaggtcgtgtcccagctgctg
cggcaggccatgcgcgaggggctgctgatgcccgtggtgaagactgagggcggtgaggac
tacacgggggccacggtcatcgaacccctgaaagggtactacgacgtccccatcaccact
ctggacttctcctcgctgtacccgtccatcatgatggcccacaatctgtgttacaccacg
ctcttgcggcccggggccgcccagaaactgggcctgacggaggaccagtttatcaagacg
cccacaggggatgagtttgtgaagacatcagttcggaaggggctcctgccccagatcctg
gagaacctgctcagtgcccggaaaagggcaaaggctgagctcgccaaagagacagatccc
ctgcgacggcaggtcttggacggtcggcagctagcgctgaaagtgagcgccaactctgtg
tatggcttcactggtgcccaggtgggcaagctgccgtgtctggagatctcacagagtgtc
accgggttcgggcgccagatgattgagaaaacaaagcagctcgtagagtccaagtacacg
gtggagaacggctacagtgccaacgccaaggtggtgtacggtgacactgactctgtcatg
tgccgattcggcgtctcctctgtggctgaggccatggccctgggtcgggaggctgcagac
tgggtgtctggccacttcccttcgcccatccggctggagtttgagaaagtctacttccca
tacctgctcatcagcaagaagcggtacgcgggcctgctcttctcctcccggcccgacgcc
catgatcgcatggactgcaagggcctggaggctgtccgccgggacaactgccccttagtg
gccaacctcgtcaccgcctcgctgcgccgcctgctcatcgaccgagacccggcgggggcc
gtggcgcatgcgcaggacgtcatctccgacctgctgtgcaaccgcatcgacatctcccag
ctggtcatcaccaaggagctgacccgcgctgctgccgactacgctggcaagcaggcccac
gtggagctggccgagaggatgaggaagcgggaccccgggagcgcgcccagcctgggcgac
cgtgtcccctacgtgatcatcagtgccgccaagggcgtggccgcctacatgaagtccgag
gaccccctcttcgtgctggagcacagcctgcccatcgacacgcagtactacctggagcag
cagctggccaagccgcttctgcgcatcttcgagcccatcctgggcgagggccgcgcagag
gccgtgctgctgcgtggggaccacacgcgctgcaagacagtgctcacgggcaaggtgggc
ggcctcctggccttcgccaaacgccgaaactgctgcatcggctgccgagctgtcctcagc
caccagggagccgtgtgcaagttctgccagccccgggagtccgagctgtatcagaaggag
gtgtcccacctgaatgctctggaggagcgcttctcccgcctgtggacccagtgccagcgc
tgtcagggcagcctgcacgaggacgtcatctgcaccagccgggactgccccatcttctac
atgcgcaagaaggtgcggaaggacctggaagaccaggagcagcttctgagacgtttcggg
ccccctggtcctgaggcctggtga
DBGET
integrated database retrieval system
