Variovorax paradoxus B4: VAPA_1c01400
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Entry
VAPA_1c01400 CDS
T02835
Name
(GenBank) putative intradiol ring-cleavage dioxygenase
KO
K03381
catechol 1,2-dioxygenase [EC:
1.13.11.1
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00361
Chlorocyclohexane and chlorobenzene degradation
vpd00362
Benzoate degradation
vpd00364
Fluorobenzoate degradation
vpd00623
Toluene degradation
vpd01100
Metabolic pathways
vpd01120
Microbial metabolism in diverse environments
vpd01220
Degradation of aromatic compounds
Module
vpd_M00568
Catechol ortho-cleavage, catechol => 3-oxoadipate
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
VAPA_1c01400
00364 Fluorobenzoate degradation
VAPA_1c01400
00361 Chlorocyclohexane and chlorobenzene degradation
VAPA_1c01400
00623 Toluene degradation
VAPA_1c01400
Enzymes [BR:
vpd01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.1 catechol 1,2-dioxygenase
VAPA_1c01400
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Gene cluster
GFIT
Motif
Pfam:
Dioxygenase_C
Dioxygenase_N
CarboxypepD_reg
Big_1
DUF4198
SpaA
SdrD_B
ToxB_N
DUF6795
Motif
Other DBs
NCBI-ProteinID:
AGU47270
UniProt:
T1X529
LinkDB
All DBs
Position
1:complement(139740..140606)
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AA seq
288 aa
AA seq
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MNIATSPDSVLGFALEAMERTPDPRLRTVMNALTRHLHAFVQEVKLTEGEFEQALEFIVA
IGQATGEKKNEVVLAADILGISTVVALQNNQDPHGESPAALLGPFWRANSPACALGDSIA
RSGTPGLPLAVAGTVRDATGQPVAGATVDVWQASPIGLYENQDPAQEDMNLRGRFTTDAE
GRFHFHSVRPAGYPVPTDGPCGVLLRAQQRHPNRPAHLHFMVSKPGHKVLITQVFADDDQ
NLESDPTFGVTRRLIGCFALAPDGKSATLQYDFQLEPGEMKFPRPPIP
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcgccacctcccccgactcggtgctgggcttcgcactcgaagccatggagcgc
acacccgacccgcggctgcgcaccgtgatgaacgcactcacgcgccacctccatgccttc
gtccaggaggtgaagctgaccgagggggagttcgagcaggcgctcgaattcatcgtcgcc
atcggccaggccacgggcgagaaaaagaacgaggtggtgctggcggccgacatcctcggt
atctccaccgtggtggcgctgcagaacaaccaggacccgcacggcgaatcgccggccgcg
ctgctcggcccgttctggcgcgcgaactcgccggcctgcgcgttgggcgacagcatcgcg
cgctcgggcacgccgggccttccgctcgcggtggcgggcacggtgcgagacgcgacgggg
cagccggtggccggcgccacggtcgacgtgtggcaggcctcgcccatcggcctgtacgag
aaccaggacccggcgcaggaagacatgaacctgcgcggccgcttcacgaccgacgccgag
ggccgcttccacttccacagcgtgcggccggccggctatccggtgccgaccgacggacct
tgcggcgtgctgctgcgcgcgcagcagcgccaccccaaccggcccgcgcacctgcacttc
atggtgagcaagccggggcacaaggtgctgatcacgcaggtgttcgccgatgacgaccag
aacctggagagcgacccgaccttcggggtgacgcggcggctgatcgggtgcttcgcgctg
gcgcccgatggcaagagcgccacgctgcagtacgacttccagctcgagcccggcgagatg
aagttcccgcgtcctcccatcccctga
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