Variovorax paradoxus B4: VAPA_1c03930
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Entry
VAPA_1c03930 CDS
T02835
Name
(GenBank) putative methylcrotonoyl-CoA carboxylase, subunit beta
KO
K13778
geranyl-CoA carboxylase beta subunit [EC:
6.4.1.5
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00907
Pinene, camphor and geraniol degradation
vpd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
VAPA_1c03930
Enzymes [BR:
vpd01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.5 geranoyl-CoA carboxylase
VAPA_1c03930
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GFIT
Motif
Pfam:
Carboxyl_trans
Motif
Other DBs
NCBI-ProteinID:
AGU47523
UniProt:
T1X4J3
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All DBs
Position
1:complement(419829..421451)
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AA seq
540 aa
AA seq
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MPVIESRLNAASESFQAHRAGMLALLGQVRAHEARAAAASNASAERFARRGQLLPRERLA
LLLDTGAPFLPLASLAGLGHDNEDLGRSVPGGGVIAGIGRVSGVRCMVSASDSGIDAGAL
QPMGLDKQLRVQEIALENKLPYVQLVESAGANLMQYRVQDFVRGGGIFRNLARLSAAGLP
VVTVTHGSSTAGGAYQTGLSDYIVMVRDRTRAFLAGPPLLKAATGEIATEEELGGAVMHT
HISGLGDYLAEGDRDAIRIARSILGGIDWARDEAPRRFAPPLYAAEELLGIMPSDGRRPV
DMREVIARIADGSEFLEFSAHYGSATVCGQMRLEGHAVGIVTNNGPIDSDGATKATHFIQ
ACCQSRTPIVYLQNITGYMVGRAHEEAGIIKHGAKMIQAVTSATVPQVTLHCGASYGAGN
YGMCGRGFAPRFCFSWPNARTAVMGGEQAAQTMAIVMEAGMARKNGGKDAVDHAKIDAMR
QQILERFERQTSVFTTSAMLLDDGVIDPRDTRAVLAEVLSVCRDADARVPQAMQFSVARP
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcatcgaatcccggctgaacgcggccagcgaatccttccaggcccatcgcgcc
ggcatgctggccttgctcgggcaggtgcgcgcgcacgaggcccgcgcggcggcggcttcg
aacgcctcggccgagcgctttgcccggcgcggccaattgctgccgcgcgaacggctcgcg
ctgctgctggacaccggcgccccctttctgccgctggcctcgctcgcagggctgggacac
gacaacgaagacctcggccggagcgtgcccggcggcggcgtgatcgcgggcatcggccgg
gtctcgggtgtgcgctgcatggtcagcgcctccgactcgggcatcgacgccggcgcgctg
cagcccatggggctggacaagcagctgcgcgtgcaggaaatcgcgctcgagaacaagctg
ccctacgtccagctggtggaaagcgcgggcgccaatctcatgcaataccgggtgcaggac
ttcgtgcgcggcggcggcatcttccgcaacctggcacggctttccgccgccggcctgccc
gtggtgacggtgacgcacggctcatcgaccgcgggcggcgcctaccagactggcctttca
gactacatcgtgatggtgcgcgaccgcacccgcgccttcctggccggcccgccgctgctc
aaggcggccaccggcgaaatcgccaccgaagaggaactgggcggtgccgtgatgcacacc
cacatttcaggcctcggcgactacctggccgagggcgaccgcgacgccatccgcatcgcg
cgctcgatcctcggcggcatcgactgggcgcgcgacgaggcgccgcgccggttcgcgccg
ccgctctacgcggccgaggaactgctcggcatcatgccgagcgacggccggcggccggtg
gacatgcgcgaggtgatcgcgcgcattgccgacggctccgagttcctcgaattcagcgcg
cactacggcagcgccacggtgtgcgggcagatgcggctcgaaggccatgcggtgggcatc
gtcaccaacaacgggcccatcgactccgacggcgccaccaaggccacgcacttcatccag
gcctgctgccagtcgcgcacgcccatcgtgtatctgcagaacatcaccggctacatggtg
ggccgcgcgcacgaggaggccggcatcatcaagcacggcgccaagatgatccaggccgtg
accagcgccacggtgccgcaggtcacgctgcattgcggcgcctcctatggtgcgggcaac
tacggcatgtgcggccgcggcttcgcgccgcgcttctgcttctcgtggcccaacgcgcgc
accgcggtgatgggcggcgagcaggcggcgcagaccatggccatcgtgatggaggccggc
atggcgcgaaagaacgggggcaaggatgcggtcgaccacgcgaagatcgacgccatgcgc
cagcagatcctcgagcgcttcgagcggcagacgagcgtgttcaccaccagtgcgatgctg
ctcgacgacggcgtgatcgacccgcgcgacacgcgcgcggtgctggccgaagtgctttcg
gtgtgccgcgatgccgatgcgcgtgtgccgcaggcgatgcagttctcggtggcgcggcca
tga
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