Variovorax paradoxus B4: VAPA_1c15700
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Entry
VAPA_1c15700 CDS
T02835
Name
(GenBank) putative cobalamin biosynthesis protein CbiB/CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00860
Porphyrin metabolism
vpd01100
Metabolic pathways
vpd01240
Biosynthesis of cofactors
Module
vpd_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
VAPA_1c15700
Enzymes [BR:
vpd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
VAPA_1c15700
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Motif
Pfam:
CobD_Cbib
AmpE
Motif
Other DBs
NCBI-ProteinID:
AGU48682
UniProt:
T1X6Y9
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All DBs
Position
1:1703852..1704853
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AA seq
333 aa
AA seq
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MSFFAILCALLIEQVRPLASHNPVYGGVLAWTRWTSRNFDAGKPHHGWVAWGLAVLMPTL
MTLGIHLLLVFTLGLPFAVLWSVAVLYVTLGFRQFSHHFTDIRDALDEGDEPLARSLLAH
WQGVDAAELPRSEIVRHVIEHSVIAAHRHVFGVLAWFSVLAALGLGPAGAVFYRMSEFVS
RYWHHKNGAAVQPSSVSVQRAAEGAWHAIDWLPARITALGFAVVGSFEEAIDCWRNDARR
FPSENDGVILAATSGAVNVRLGGGALSPIPATDPLPRAQAGDSMADGRRLDSGSTPGREP
EPGHLRSVVGLVWRSVVMWMVLLALLTLARLLG
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgagcttctttgccatcctgtgtgcgttgctgatcgagcaggtgaggccgctcgcctcc
cacaacccggtgtacggcggcgtgctggcctggacgcgctggaccagccgcaatttcgac
gccggcaagccgcaccacggatgggtcgcatggggccttgcggtgctcatgccgacgctg
atgacgctgggcattcacctgctgctggtgttcacgctgggactgccgttcgcggtgctc
tggagcgttgcggtgctctacgtcacgctcggttttcggcagttcagccaccacttcacg
gacatccgcgatgcgctcgacgaaggcgacgagccgctggcgcgctcgctgctggcacat
tggcagggtgtggatgcggccgagctgccgcgcagcgaaatcgttcgccatgtgatcgaa
cattcggtgattgcggcgcatcgccacgtgttcggcgtgctggcctggttctcggtgctg
gcggccctgggcctggggccggccggcgcggtgttctatcggatgagcgagttcgtctcg
cgctactggcaccacaagaacggcgcggcggtgcagccttcgagcgtctcggtgcagcgg
gccgcggagggcgcctggcacgccatcgactggttgcctgcgcgcatcaccgcgctgggc
tttgccgtcgtcggcagtttcgaagaggcgatcgactgctggcgcaacgacgcgcggcgc
tttccgagcgagaacgacggcgtgatcctcgcggcgacctcgggcgccgtcaatgtgcgc
ttgggcggcggcgcgctgagcccgattccggccaccgacccgctgccgcgcgcgcaggct
ggcgattcgatggccgatggccgccggctcgacagcggcagcacgccgggccgcgagccc
gaacccggccacctgcgcagcgtggtgggcctggtgtggcgctcggtggtgatgtggatg
gtgctgctggccttgctcacgctggctcgcctgctcggttga
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