KEGG   Variovorax paradoxus B4: VAPA_1c16230
Entry
VAPA_1c16230      CDS       T02835                                 
Name
(GenBank) type 2/4 secretion system protein
  KO
K02283  pilus assembly protein CpaF [EC:7.4.2.8]
Organism
vpd  Variovorax paradoxus B4
Pathway
vpd02020  Two-component system
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    VAPA_1c16230
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpd02044]
    VAPA_1c16230
   02035 Bacterial motility proteins [BR:vpd02035]
    VAPA_1c16230
Enzymes [BR:vpd01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     VAPA_1c16230
Secretion system [BR:vpd02044]
 Type II secretion system
  Tight adherence (Tad) export apparatus
   VAPA_1c16230
Bacterial motility proteins [BR:vpd02035]
 Pilus system
  Pilus assembly proteins
   VAPA_1c16230
SSDB
Motif
Pfam: T2SSE ABC_tran Mg_chelatase Zeta_toxin AAA_28 AAA_29 AAA_2 AAA_19 AAA_5 AAA_30 AAA_23 AAA_7 Pox_A32
Other DBs
NCBI-ProteinID: AGU48734
UniProt: T1X8T8
LinkDB
Position
1:1753795..1755168
AA seq 457 aa
MSFREQLNAIEAEPVARSPAPPLADAALSSFASDSYKLLKERMHLKLLDRFDLAVLETLK
PEVLRHEISTMVTRLLQEEPEALNDIERRTLIRDIQHEMLGFGPIELLMADPTVSDILVN
SHDQIYVERKGRLELTDVSFTDEKHLLRIIDKIVSLVGRRIDESSPMVDARLPDGSRVNA
VIAPVALDGPMMSIRRFAKIPLKMENLVNDLKTLTPQMGLMLEGLASAKINMLISGGTGA
GKTTLLNILSGFIPATERIITIEDAAELQLQQPHVARMETRPMNIEGKGEITQRALVRNA
LRMRPDRIVIGEVRGAEAVDMLQAMNTGHEGSLTTIHANSPRDALARLENMISMANLNLP
HHSVRQQIASAITVVIQVLRLVDGRRKVTSIQEITGMEGEVVTMQEIFAFRQTGMGPDGR
VRGYFHATGVRPKFVERLHAFGVVLPDTMFDPDKHYE
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgtcattcagagaacagctcaatgcgatcgaagccgagccggttgcgcgctcgccggcg
ccgcccttggccgatgcagcgctttcatcctttgcctcggactcctacaagctcctgaag
gagcggatgcacctgaagctgctggaccgcttcgacctggcggtgcttgaaaccctgaag
cccgaggtgctgcgccatgagatctccaccatggtcacgcggctgctgcaggaagagccc
gaggcgctgaacgacatcgagcggcgcacgctgatccgcgacatccagcacgaaatgctc
ggcttcgggccgatcgagctgctgatggccgacccgacggtgtccgacatcctggtcaac
tcgcatgaccagatctatgtcgagcgcaagggccgcctggagctgacggacgtcagtttc
accgacgagaagcacctgctgcgcatcatcgacaagatcgtctcgctggtggggcggcgc
atcgacgagtccagccccatggtcgatgcccggttgccggacggatcgcgcgtcaatgcg
gtgatcgcgccggtggcgctggacggcccgatgatgtcgattcgccgcttcgcgaagatt
ccgctgaagatggaaaacctggtgaacgacctcaagacgctgacgccgcagatggggctg
atgctcgaagggctggccagcgcgaagatcaacatgctgatctccggcggcaccggcgcc
ggcaagacgacgctgctgaacattctctccggcttcattcccgccaccgaacgcatcatc
accatcgaggacgcggccgagctccagctccagcagccgcacgtggcccgcatggaaacc
cggccgatgaacatcgaaggcaagggcgagatcacgcagcgcgcgctggtgcgaaacgca
ctgcgcatgcggcccgaccgcatcgtgattggcgaggtgcgcggcgccgaggcggtcgac
atgctgcaggcgatgaacaccggccacgaaggctcgctgaccaccatccacgcgaacagc
ccgcgcgatgcgctggcgcggctggagaacatgatcagcatggccaacctgaaccttccg
catcattccgtgcgccagcagatcgcatcggccatcaccgtcgtgatccaggtcctgcgt
ctggtcgatggacggcgcaaggtcaccagcatccaggaaattaccggcatggaaggcgag
gtggtcacgatgcaggagatcttcgcgttccgccagaccggcatgggccccgatggccgg
gtgcgcgggtacttccatgccacgggcgtccggccgaaattcgtcgagcgcctgcacgcc
ttcggcgtggtgctgcccgacaccatgttcgatcccgacaagcactacgaatag

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