Variovorax paradoxus B4: VAPA_1c29880
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Entry
VAPA_1c29880 CDS
T02835
Symbol
cobQ
Name
(GenBank) cobyric acid synthase CobQ
KO
K02232
adenosylcobyric acid synthase [EC:
6.3.5.10
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00860
Porphyrin metabolism
vpd01100
Metabolic pathways
vpd01240
Biosynthesis of cofactors
Module
vpd_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
VAPA_1c29880 (cobQ)
Enzymes [BR:
vpd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.10 adenosylcobyric acid synthase (glutamine-hydrolysing)
VAPA_1c29880 (cobQ)
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Motif
Pfam:
GATase_3
CbiA
AAA_26
nSTAND3
AAA_22
GATase
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
AGU50081
UniProt:
T1XC87
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All DBs
Position
1:complement(3151039..3152478)
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AA seq
479 aa
AA seq
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MTTRCVMILGTTSGAGKSWLTAALCRWYARQGLKVAPFKAQNMSNNARVVDGGEIGSAQY
FQALAARAVPDVRMNPLLLKPERDTHSQVVLMGQVSAELTAMPWRGRSERVWPQIAKALD
ALRAENDVVVIEGAGSPAEINLMASDIVNLRVARHADARCLLVTDIDRGGAFAHLYGTWA
LMPESDRALLRGFVLNKFRGDASLLAPAPQQLQALTGIATVATLPMWREHGLPEEDGVFD
DRGHASGPVTRTVAVVAYPRISNLDEFQPLKKVPGVRLVWARTPADVAGADWIVLPGSKH
TSGDLAWLRAQGLDRAIAAHAAGGGAVLGVCGGLQMLGEALVDPHGIDGNAPGLGLLPLV
TVFEREKTVRHRAAVFGQLGGAWASLSNVPVTGYEIHHGQTAIHPQMAQDGRAVMPEGLA
WQNARGNVLGLYLHGLFEDAAALHALFGAAAPTLDATFDGLADFIDTHFEAGVLQGLIA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgacaacccgatgcgtgatgattctcggcacgaccagtggcgccggcaagagctggctg
accgccgcgctgtgccgctggtacgcgcgccagggcctcaaggtggcgcccttcaaggcg
cagaacatgagcaacaacgcccgcgtggtcgacggcggcgaaatcggcagcgcgcagtat
ttccaggcattggccgcccgtgccgtgcccgacgtgcgcatgaacccgctgctgctcaag
cccgagcgcgacacccacagccaggtggtgctgatggggcaggtgagcgcggagctcacg
gccatgccatggcgcggccgcagcgagcgcgtctggccgcagattgcaaaggcgctcgac
gcgctgcgcgccgagaacgacgtggtggtgatcgaaggcgccggctcgccggccgagatc
aacctgatggccagcgacatcgtcaacctgcgcgtggcccgccatgcggatgcgcgctgc
ctgctggtgaccgacatcgaccgcggcggcgccttcgcgcatctgtacggcacctgggca
ttgatgcccgagagcgaccgtgcgctgctgcgcggcttcgtgctcaacaagttccgcggc
gacgcctcgctgctggcgccggcgccgcagcaattgcaggcgctgaccggcatcgcgacc
gtcgccacgctgccgatgtggcgggagcacggcctgcccgaggaagacggcgtgttcgat
gatcgaggccatgccagcgggccggtcacgcgcacggtggccgttgtggcctatccgcgc
atcagcaatctcgacgagttccagccactcaagaaagtgccgggcgtccgcctggtctgg
gcgcgcacgccggcggatgtggccggcgccgactggatcgtgctgcccggctccaagcac
accagcggcgacctcgcatggctgcgcgcgcagggcctggaccgcgccatcgccgcgcac
gcggccggcggcggcgccgtactgggcgtctgcggcggcctgcagatgctgggcgaggcg
ctggtcgatccgcacggcatcgacggcaatgcgccgggcctgggcctgctgccgctggtg
acggtgttcgagcgcgaaaagacggtgcgccacagggcggcagtcttcggccagctgggc
ggcgcatgggcttcgctctcgaacgtgccggtgaccggctacgaaatccatcacggccag
accgccatccacccgcagatggcgcaggacggccgtgccgtgatgcccgagggcctggcc
tggcagaacgcgcgcggcaacgtgctgggcctctacctgcacggcctgttcgaggacgcg
gccgcgctccacgcactcttcggcgccgcggcacccacgctcgacgccaccttcgacggc
ctggccgatttcatagacacccacttcgaggccggcgtactgcagggcctgatcgcatga
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