Variovorax paradoxus B4: VAPA_1c30040
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Entry
VAPA_1c30040 CDS
T02835
Name
(GenBank) putative cobyrinic acid a,c-diamide synthase CobQ/CobB
KO
K02224
cobyrinic acid a,c-diamide synthase [EC:
6.3.5.9
6.3.5.11
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00860
Porphyrin metabolism
vpd01100
Metabolic pathways
vpd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
VAPA_1c30040
Enzymes [BR:
vpd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.9 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing)
VAPA_1c30040
6.3.5.11 cobyrinate a,c-diamide synthase
VAPA_1c30040
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Motif
Pfam:
GATase_3
CbiA
AAA_26
AAA_30
SNO
Motif
Other DBs
NCBI-ProteinID:
AGU50097
UniProt:
T1XB15
LinkDB
All DBs
Position
1:complement(3168220..3169629)
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AA seq
469 aa
AA seq
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MDTAISQPDANSELSAAHSCAAVLVAAPASGQGKTTVTAALARLHARQGRRVRVFKCGPD
FLDPHWLALASGVPVHSLDLWMTGEADCRRRLHAAAAEADLLIVEGVMGLFDGSPSAADL
AERFGLPVLAVIDAQAMAGTFGALAYGLQNFRPTLPWAGVLANRVAGERHAGMLKEALRE
PAQWLGGLPRGAGFELSERHLGLVAAHELDDAMARLDAAADAMAATPIGKRLLHEWPQVR
FEPAAAEPQAHIAPLLEGRTIAIARDAAFAFIYPANLDVLAALGAQVAFFSPLAGDALPA
CDAIWLPGGYPELHAKALSTCGSLRAALAAHVAAGKPVWAECGGMMSLFEQLETADGAAH
SLWGLLPGRVTMHKRLAGLGPQQLKLGAHTLRGHTFHYSSCETPLIPAAFTGRPGAEART
GEAFYVRGPVRASYFHAWFASSPVATARLFGAMPIELERETPEVDAHAR
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
gtggacaccgcaataagccaacccgacgccaacagcgaattgagcgctgcgcacagctgc
gccgccgtgctggtggcggcgccggcttcggggcagggcaagaccacggtcacggccgcg
ctggcgcggctgcacgcgcgccagggccggcgcgtgcgggtcttcaagtgcgggcccgac
tttctcgatccgcactggctggcgcttgccagcggcgtgccggtgcactcgctcgacctc
tggatgaccggcgaggcggattgccgccggcggctgcatgcggccgcggccgaggccgac
ctgcttatcgtcgaaggcgtgatgggcctcttcgacggcagccccagcgcggcggacctg
gccgagcgcttcggcctgccggtgctggccgtgatcgatgcgcaggccatggccggcacc
ttcggtgcgctggcctatgggttgcagaatttccgccccacactgccctgggccggcgtg
ctggccaaccgcgtggcgggcgagcgtcatgccggcatgctgaaagaggcattgcgcgag
ccggcgcaatggctcggcggcttgccgcgcggcgccggtttcgagctgtccgagcggcac
ctgggcctggtcgccgcgcatgaactcgacgacgcgatggcccggctcgatgcggccgcc
gacgcgatggctgcaacgcccatcggcaagcggctgcttcatgaatggccgcaggtgcgt
ttcgagcctgctgcggccgagccgcaggcgcacatcgcccccttgctggaaggccgcacc
atcgccatcgcgcgcgatgcggcctttgccttcatctatccggccaacctcgatgtgctt
gcggcgctgggtgcgcaggtcgcgttcttctctccgctcgccggagatgcgctgcccgca
tgcgatgcgatctggctgcccggcggctaccccgagctgcatgccaaggcgctgtccacc
tgcggctcgctgcgtgcggcgctggccgcgcatgtcgccgcgggcaagccggtatgggcc
gaatgcggcggcatgatgtcgctgttcgagcaactggaaacggccgatggcgcagcgcac
tcgctctgggggctgctgccgggccgggtgacgatgcacaagcggctggctggcctcggg
ccgcagcagctcaagcttggcgcccacaccctgcgcgggcacacctttcactattcgagt
tgcgaaacgcccctgataccggcggccttcaccggcaggccgggtgcggaagctcgtacg
ggagaggccttctatgtgcgcggcccggtgcgggcaagctatttccacgcgtggtttgcg
tccagccccgtggccacggccaggctgttcggcgcgatgccgatcgagctggaacgcgaa
accccggaggtagacgcgcatgcccgttga
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