Variovorax paradoxus B4: VAPA_1c30140
Help
Entry
VAPA_1c30140 CDS
T02835
Name
(GenBank) putative CoA-ligase
KO
K18661
malonyl-CoA/methylmalonyl-CoA synthetase [EC:
6.2.1.76
6.2.1.-]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00280
Valine, leucine and isoleucine degradation
vpd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
VAPA_1c30140
Enzymes [BR:
vpd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.76 malonate---CoA ligase
VAPA_1c30140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AGU50107
UniProt:
T1XB24
LinkDB
All DBs
Position
1:complement(3179180..3180715)
Genome browser
AA seq
511 aa
AA seq
DB search
MKTKANSNLFAALRAAFPADLGRIAVETDNGLFYSWQDLDRASAMMANLFGALGLEEGAR
IAVQVEKSVEAMILYLATLRAGYVFLPLNTAYQSAEIEYFIGNAEPAVVVCTRRNAAWVE
PIASAAGTRHVFTLDDDRTGTLLELAAQCSDRHEVARTKSGDLAAILYTSGTTGRSKGAM
LTHGNLLSNAEVLKNYWGWKKGDVLIHALPIFHVHGLFVALHGALLNGSKMIWLTRFDPK
RVIEKLPEATVFMGVPTLYVRLLAEPGLTREAVRNMRLFVAGSAPLLIETFDEWRERTGH
TILERYGMSETIMLTSNPYSPAQGERRGGTVGFPLPGVRLRVRDDAGRECTADEIGSIEV
SGPNVFAGYWRMPEKTKEEFTADGFFKTGDVGKIDGRGYVTIVGRSKDLIISGGYNVYPA
EIEGYINELPGVAESAVVGVPHPDFGEVGVAIVIAKAGGALDADAIVAELKSKLANFKIP
KRCFVVPELPRNTMGKVQKALLREQHKGLFV
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgaaagccaattccaacctgtttgccgccttgcgcgcggcctttcccgccgac
ctcggccgcattgccgtggaaaccgacaacggcctgttctattcgtggcaagacctcgat
cgcgccagcgcaatgatggccaacctgttcggcgcgctggggctggaggagggcgcccgc
atcgcggtgcaggtcgagaaatcggtcgaggcgatgattctctatctcgccacgctgcgc
gccggctacgtgttcctgccgctgaacactgcctaccagagcgcggagatcgaatatttc
atcggcaacgccgaaccggccgtggtggtgtgcacccggcgcaatgccgcgtgggtcgag
cccatcgccagtgcagcaggcacccggcacgtgttcacgctggacgacgaccgcaccggc
accctgctggagcttgccgcgcaatgcagcgaccggcacgaggtggcgcggacgaagtcc
ggcgacctggccgccatcctctataccagcggcaccaccggccgcagcaagggcgcaatg
ctcacgcacggcaacctgctgtcgaacgccgaggtgctcaagaactactggggttggaaa
aaaggcgacgtgctgatccacgcgctgccgatcttccacgtgcatggccttttcgttgcg
ctccacggtgcgctgctcaatggcagcaagatgatctggctgaccaggttcgacccgaag
cgcgtgatcgagaagctgcccgaggcgaccgtgttcatgggcgtgcccacgctctacgtg
cggctgctggcggagcccggcctcacgcgcgaagcggtgcgcaacatgcggctgttcgtc
gccggttccgcgccgctgctcatcgagaccttcgacgaatggcgcgaacgcaccggccac
accattctggagcgctacggcatgagcgagaccatcatgctcacctccaacccctacagt
cccgcgcagggcgagcgccgcggcggcacggtgggctttcccttgccgggcgtgcggctg
cgcgtgcgcgacgacgccggccgcgagtgcaccgcggacgagatcggcagcatcgaggtc
agcggtccgaacgtgttcgcgggctactggcgcatgccggagaaaacgaaggaagaattc
accgccgatggtttcttcaagaccggcgacgtcggcaagatcgatggccgcggctacgtc
accattgtcggacgcagcaaggacctgatcatcagcggcggctacaacgtctaccccgcc
gagatcgagggctacatcaacgagctgcccggcgtggccgaaagcgcggtggtcggcgtg
ccgcaccccgacttcggcgaggtgggcgtggccatcgtgatcgccaaggcgggtggggcg
ctcgacgccgatgccatcgtggcggaactcaagtcgaagctcgcgaacttcaagattccc
aagcgctgcttcgtcgtgcccgagctgccacgcaacaccatgggcaaggtgcagaaggcg
ctgctgcgggagcagcacaaggggctgttcgtctag
DBGET
integrated database retrieval system
