Variovorax paradoxus B4: VAPA_1c33270
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Entry
VAPA_1c33270 CDS
T02835
Name
(GenBank) putative xanthine dehydrogenase, molybdenum-binding subunit YagR
KO
K11177
xanthine dehydrogenase YagR molybdenum-binding subunit [EC:
1.17.1.4
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00230
Purine metabolism
vpd01100
Metabolic pathways
vpd01120
Microbial metabolism in diverse environments
vpd01232
Nucleotide metabolism
Module
vpd_M00958
Adenine ribonucleotide degradation, AMP => Urate
vpd_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
VAPA_1c33270
Enzymes [BR:
vpd01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
VAPA_1c33270
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MoCoBD_1
MoCoBD_2
Ald_Xan_dh_C
Motif
Other DBs
NCBI-ProteinID:
AGU50413
UniProt:
T1XCY0
LinkDB
All DBs
Position
1:complement(3519859..3522099)
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AA seq
746 aa
AA seq
DB search
MATSLKTVMTKRTPRAGAERVDARDKVRGATRYAADDVRAGLLHAALVPSRIARGTVTGI
DTAAAQRVRGVRTVFTHENIGSFDTGGFLMGGGFGFQSFYPLRSPQVAYRGQTVAMVVAD
TPEAAREAAALVAVTYAAIPFVATIDAPDAQPQAQSALLPQPMFADRRAGDAEAALQGAA
FTVDAAYELPVQHQNPMEIIATVAEWSADGVLTIHEPTQNAESVRHGLAKQLGIEPAKVR
VLSPTVGGGFGQKNSLQSHTALVAIAARTLGRPVKLVLSRSQLFHNASFRPASRHRVRLG
ADRGGKLVAAIHEIDQQTSRHDLFPSSGTEITSRLYGIGNFLGRERLVRTDVQTPGYMRA
PFEHPAAFAFESAVDEMAYALGRDPVAFRLANDAAVDPLSGKPFSSRHLAECLAKGSSAF
GWARRTMAPRSMRAPDGSFIGWGVAAGAYKAAIAPAIAKVRLDASGTVRVAVGGHEMGQG
IRTAIALTVARVLGAPVAAVEILVGDTTAAPQHLTAGSWGTATALPPVQEAAQRLMDDLR
QNAGAQAGANGATAVALLRASGRPFAEAESRMRAPGQPEQVFGRLTGGLPAAAGPVYPDF
VAFSFIAHFVEVRIEPTTRRIRVPRVLSVADCGTVASLRTARSQVEGGVVWGIGAALREA
SEVDARYGGFLNADLAEYVLPVAADIGRIDVDFVGKPDTRLNAMGVKGLGEVAMVGVAPA
IVNAVFHATGKRLRRLPLRLEDLLES
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgagcctcaagacagtgatgacgaagcgcacgcctcgcgcgggtgccgagcgc
gtcgacgcgcgcgacaaggtgcgtggcgccacgcgctatgcggcggacgatgtgcgcgcc
gggctgctgcatgccgcgctggtgccgtcgcgtattgcgcgcggcaccgtcaccggcatc
gacaccgcggcggcgcagcgcgtgcgcggcgttcgcacggtgttcacgcacgagaacatc
ggcagcttcgacaccggcggcttcctgatgggcggcggcttcggcttccagagcttctat
ccgctgcgctcgccgcaggtcgcctaccgcggccagaccgtggccatggtggtggccgac
acgcccgaggcggcgcgcgaggccgcggcgctggtggccgtgacctacgccgccattcct
ttcgtggcgaccatcgatgcacccgacgcccagccgcaggcgcaatcggccctgctgccg
cagcccatgttcgccgaccggcgcgcgggcgatgccgaagccgcgctccagggcgcggcc
ttcacggtggacgcggcgtacgagctgccggtccagcaccagaacccgatggagatcatc
gcgaccgtggccgaatggagcgccgacggcgtgctcaccatccacgagccaacccagaat
gccgaaagcgtgcgccacggcctggcgaagcagctcggcatcgagcccgccaaggtgcgc
gtgctgtcacccacggtgggcggcggtttcggccagaagaattcgctgcagtcgcacacg
gcgctggtggcgattgcggcgcgcacgctgggccggccggtcaagctcgtgctgtcgcgc
agccagctgttccacaacgcaagcttcaggcccgcaagccgccatcgcgtgcggctgggc
gccgaccgcggcggcaagctggttgccgccatccacgagatcgatcagcagacctcgcgc
cacgacctgtttccatcgagcggcaccgagatcacttcgcggctctacggcatcggcaat
ttcctcggccgcgagcggctcgtgcgcaccgacgtgcagacgcccggctacatgcgcgcg
ccgttcgagcatccggccgccttcgcattcgaaagcgcggtggacgagatggcctacgcg
ctcggccgcgatccggtcgcgttccggctcgcgaacgacgcggccgtcgatccgctcagc
ggcaagcccttttcgtcgcgccacctggccgagtgccttgccaagggcagcagcgccttc
ggctgggcgcgccgcacgatggcgccgcgctcgatgcgcgcgcccgacggcagcttcatc
ggatggggcgtggcggccggtgcctacaaggcggccattgccccggccattgccaaggtg
cggctcgatgccagcggcacggtgcgggtggcggtcggcggccacgagatggggcagggc
atccgcaccgccattgcattgacggtggcacgcgtgctcggcgcgccggtggccgcggtg
gagatcctggtcggcgacaccaccgccgcgccccagcacctgaccgccggctcctggggc
acggccaccgcgttgccgccggtgcaggaagccgcgcagcggctcatggacgacctgcgg
cagaacgccggtgcgcaagctggtgcgaacggcgccacggccgtggcgctgctgcgggct
tccggccgtccctttgccgaggccgagagccggatgcgcgcgccgggccagcccgagcag
gtcttcggccggctcaccggcggcctgcccgccgcggcggggccggtgtatccggacttc
gtcgccttcagcttcatcgcgcacttcgtcgaggtgcgcatcgaacccaccacgcggcgc
atccgcgtgccgcgcgtgctcagcgtggccgactgcggcacggtggccagcctgcgcacc
gcgcgcagccaggtcgaaggcggcgtggtgtggggcattggcgccgccttgcgcgaggcg
agcgaggtggatgcgcgctacggcggcttcctcaatgcggacctggcggagtacgtgctg
cccgtggcggcggacatcggccgcatcgatgtcgactttgtcggcaagcccgacacgcgg
ctcaatgccatgggcgtgaaaggcctgggcgaagtggccatggtgggcgtggcgcccgcc
atcgtgaatgcggtgttccatgccaccggcaagcgcttgcgcaggctgccgctgcggctg
gaggacctgctcgaaagctag
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