Variovorax paradoxus B4: VAPA_1c35780
Help
Entry
VAPA_1c35780 CDS
T02835
Name
(GenBank) putative serine racemase
KO
K22589
threo-3-hydroxy-L-aspartate ammonia-lyase [EC:
4.3.1.16
]
Organism
vpd
Variovorax paradoxus B4
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
VAPA_1c35780
Enzymes [BR:
vpd01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.16 threo-3-hydroxy-L-aspartate ammonia-lyase
VAPA_1c35780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
FeS
Motif
Other DBs
NCBI-ProteinID:
AGU50662
UniProt:
T1XCM2
LinkDB
All DBs
Position
1:complement(3777373..3778329)
Genome browser
AA seq
318 aa
AA seq
DB search
MQLPTYDDVIAAAARLEGHAHRTPVLRSQTADERWGARFFFKCENFQRMGAFKFRGAFNA
LSKFDAAQRKGGVIAFSSGNHAQAIALSARLLSMPAVIVMPKDAPAAKVAATQGYGAEVV
TYDRFAEDREALTKRLAQERGITMIPPYDHPDVLTGQGTAVKELIEETGPLDHLFVCLGG
GGLLSGSALSARALAPDCKVYGVEPEAGNDGQQSLRAGKIVHIETPKTIADGAQTQHLGE
YTFGIIRRDVDDIFTVTDEQLVEAMRFFAERMKIVVEPTGCLAFAGAIAAGKAIAGQRIG
IVVSGGNVDLSRYAALLA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcaactacctacctacgacgacgtcatcgccgcggccgcgcggctcgagggccatgcc
caccgcacgcccgtgctgcgatcgcagacggccgacgaacgctggggcgccaggttcttc
ttcaagtgcgagaacttccagcgcatgggcgcattcaagttccgcggtgcgttcaatgcg
ctgtcgaagttcgacgccgcgcagcgcaagggcggcgtgatcgcgttctcttcgggcaac
cacgcgcaggccatcgcgctgtcggcccggctgctgtcgatgccggccgtgatcgtcatg
cccaaggacgcgccggccgccaaggtcgcggccacgcagggctacggcgccgaagtggtg
acgtacgaccgcttcgccgaggatcgcgaggcgctcacgaagcggctcgcgcaggaacgc
ggcatcacgatgatcccgccctacgaccatccggacgtgctcacggggcaaggcacggcg
gtgaaggaactgatcgaggaaaccggcccgctcgaccacctgttcgtgtgcctgggcggc
ggcgggctgctgtcgggttcggcgctgtcggcgcgtgcgctggcgcccgattgcaaggtc
tacggcgtggagcccgaagcgggcaacgacggccagcagtcgctgcgcgccgggaagatc
gtgcacatcgaaacgcccaagaccattgccgacggtgcgcagacgcagcacctgggcgaa
tacaccttcggcatcatccggcgcgacgtggacgacatcttcaccgtgacggacgagcag
ctcgtcgaggcgatgcgcttctttgccgagcgcatgaagatcgtggtggaaccgaccggt
tgcctcgccttcgcgggcgccattgctgcgggcaaggccatcgcgggccagcgcatcggc
atcgtggtcagcggcggcaacgtcgatctctcgcgctacgcggcgctgctcgcgtag
DBGET
integrated database retrieval system
