KEGG   Variovorax paradoxus B4: VAPA_1c46220
Entry
VAPA_1c46220      CDS       T02835                                 
Name
(GenBank) putative type II secretion system protein E
  KO
K02283  pilus assembly protein CpaF [EC:7.4.2.8]
Organism
vpd  Variovorax paradoxus B4
Pathway
vpd02020  Two-component system
Brite
KEGG Orthology (KO) [BR:vpd00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    VAPA_1c46220
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpd02044]
    VAPA_1c46220
   02035 Bacterial motility proteins [BR:vpd02035]
    VAPA_1c46220
Enzymes [BR:vpd01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     VAPA_1c46220
Secretion system [BR:vpd02044]
 Type II secretion system
  Tight adherence (Tad) export apparatus
   VAPA_1c46220
Bacterial motility proteins [BR:vpd02035]
 Pilus system
  Pilus assembly proteins
   VAPA_1c46220
SSDB
Motif
Pfam: T2SSE AAA_16 AAA_29 Dynamin_N AAA_28 Mg_chelatase FtsK_SpoIIIE MCM Zeta_toxin
Other DBs
NCBI-ProteinID: AGU51690
UniProt: T1XHT4
LinkDB
Position
1:4863521..4864837
AA seq 438 aa
MSNDLEFADDDQAFINSQQFQDIKSWTHDHLLSRIEELGAEFGRWSRASIQQFVELEVDS
FVRLRRVPINDREMQLISDALTKELAGFGPLEDLLNDPAVEDILINGYQNVYVSRHGMLE
RETVRFADAEHVMRIVRRILAPLGRRLDESNPMVDARLPDGGRINVIIEPLAIDGLSVSI
RKFRKEPLTPADLVKLGTFDAGMAQLLEIAVRARCNILVSGGTSSGKTSLLNALATFIPA
RERVITIEDTAELSLGTSHVVRLESRPGGFDGTGVVSIRDLLRNSLRMRPDRIIVGEVRG
AEVIEMMQAMNTGHEGSMGTIHASSPRECLYRLEMLAGFAGYQGSEVSLRRQIANAIDFI
VQIGRLSSGQRRILSLSEVTGVNDNVVAMQELYRYEPITSPDGEERDRWISLGIAPHSPK
ITRFRQSLARAQQGDNRG
NT seq 1317 nt   +upstreamnt  +downstreamnt
atgtccaacgatctcgaattcgccgacgacgaccaggcgttcatcaattcccagcagttc
caggacatcaagagctggacgcatgaccatctgctgagccgcatcgaagagcttggcgcg
gagttcggccgctggtctcgtgcctcgatccagcagtttgtcgaactggaggtcgacagc
ttcgttcgcctgcgccgcgtgccgatcaacgaccgcgagatgcagctcatctccgatgca
ctgaccaaggaacttgcgggcttcgggccgctggaagatctgctcaacgatcccgcggtc
gaagacattttgatcaacggctaccagaacgtctacgtatcgcgccacggcatgctggag
cgcgagaccgtgcgatttgccgatgcggagcatgtgatgcgcatcgtgcgccgcatcctc
gcaccgctgggccgccggctcgacgaatccaacccgatggtcgatgcgcgcctgcccgac
ggcggccgcatcaacgtgatcatcgagccgctggccatcgacggactctcggtctcgatc
cgtaagttccgcaaggagccgctcacgccggccgacctggtgaagctcggcaccttcgac
gcaggcatggcgcagttgctggagattgccgtgcgtgcgcgctgcaacatccttgtgagc
ggcggcaccagctcgggcaagacatcgctgctcaatgcgctcgccaccttcattcccgcg
cgcgagcgcgtcatcaccatcgaagacacggcggaactgtcgctgggcacgagccacgtc
gtccggctcgaaagccgccccggcggcttcgacggcacgggtgtggtgtcgatccgcgac
ctgctgcgcaacagcctgcgcatgcggcccgaccggatcatcgtgggcgaagtgcgcggc
gccgaggtgatcgagatgatgcaggcgatgaacacgggccacgaaggctcaatgggcacc
atccacgcaagctcgccgcgcgaatgcctctaccgccttgaaatgctcgcgggctttgcg
ggctaccagggcagcgaagtaagcctgcgccggcagattgccaatgccatcgatttcatc
gtgcagatcggacgcctctcgagcgggcagcgccgcatcctttcattgagcgaagtcacc
ggcgtcaacgacaacgtggtcgcaatgcaggagctctaccgctacgagccgatcacgtcg
cccgacggcgaggagcgcgatcgctggatatcgctgggcatagcaccgcattcgcccaag
atcacgcgcttccgccagtcgctggcgcgcgcgcagcagggagacaaccgtggctaa

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