Variovorax paradoxus B4: VAPA_1c48110
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Entry
VAPA_1c48110 CDS
T02835
Name
(GenBank) putative acyl-CoA ligase
KO
K24012
acetate---CoA ligase (ADP-forming) [EC:
6.2.1.13
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00010
Glycolysis / Gluconeogenesis
vpd00620
Pyruvate metabolism
vpd00640
Propanoate metabolism
vpd01100
Metabolic pathways
vpd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
VAPA_1c48110
00620 Pyruvate metabolism
VAPA_1c48110
00640 Propanoate metabolism
VAPA_1c48110
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
vpd01004
]
VAPA_1c48110
Enzymes [BR:
vpd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.13 acetate---CoA ligase (ADP-forming)
VAPA_1c48110
Lipid biosynthesis proteins [BR:
vpd01004
]
Acyl-CoA synthetase
Short/medium chain acyl-CoA synthetase
VAPA_1c48110
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_5
Succ_CoA_lig
CoA_binding_2
CoA_binding
Ligase_CoA_2
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
AGU51876
UniProt:
T1XH82
LinkDB
All DBs
Position
1:5069043..5071160
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AA seq
705 aa
AA seq
DB search
MPTDFFSSQAESLSALFAPRAIAVVGASSNAQKIGGIPVDYQRRFGFEGALYPVNPNAER
IQELPAFPSLRAIGQPVDLAILAVPSALVDGALDDAIAAGVKGVVLFSSGFAEVDAEGAA
AQVRLGDKARAAGVRLVGPNCLGFMNVARHVYATFSPAPGVGRVMPGHIGLVSQSGAFGA
YAYAMARARGVGLSLWATTGNEADVQVADCLAWLAQDPGTDVIMAYMEGCRDGPRLRAAL
ALAQANGKPVVMVKVGRTALGAEAAASHTAALAGDDAVYDAVFRQYGVLRARNLTEFFDL
AHSAAVAGRPRDRSIGLFTLSGGVGALMADEASAQGLDVRPLGEAAQDTLRSWVPFAAPR
NPVDITGQVTNDMTLIERTARVMLDDRGFASWMGFLAAAGASDAFWPVLRSLVTSLREAY
PDTLLAVSTLLSPEHRAELEAMRCLVFADPSDGIRTIAALAGLKPAAAVAAAPASMAPSL
TLAPGTMSEPDALVLLADAGVPVVAHRVVRSADEAAAAAEALGDAVVVKIVSADIPHKSD
VGGVALGLRGAAQARAAFERTRDHALTARPDARLDGALVARMLTGGVECIAGVHRDPVFG
PVLMFGLGGIHVETLRDVSLRALPITRDDALAMVRELRAFAILNGARGRPPVDLDSIADA
LCALADLAQRAGDSLDSAEINPLIARPQAEGGCVAVDALVVGRAP
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgcccacggacttcttctcctcgcaagccgaatccctgtcggccctgttcgcgccgcgc
gccatcgcggtggtcggcgcctcgtccaacgcgcagaagatcggcggcatcccggtcgac
taccagcgccgcttcggcttcgaaggagcgctctaccccgtcaacccgaacgccgagcgc
atccaggagctgccggcttttcccagcctgcgcgccatcggccagccggtggacctggcc
atcctcgcggtgccgtcggcgctggtcgacggcgcgctcgacgatgccatcgcggcgggc
gtgaagggcgtggtgctgttttcctcgggcttcgcggaagtggacgcagaaggcgccgca
gcgcaggtgcggctcggcgacaaggcgcgtgccgcgggcgtgcggctggtcggccccaac
tgcctgggcttcatgaacgtcgcacgccatgtgtatgcgaccttctccccggcgcccggc
gtgggccgcgtgatgccggggcacatcgggctggtgagccagtcgggcgcgttcggcgcc
tatgcgtacgcgatggcgcgggcgcgcggcgtcggcctgtcgctgtgggccaccaccggc
aacgaggccgacgtgcaggtcgccgactgcctggcctggctcgcgcaggaccctggcacc
gacgtgatcatggcctacatggagggctgccgcgacggcccccggctgcgcgcggcgctg
gccctcgcgcaggccaacggcaagccggtggtgatggtcaaggtcgggcgcaccgcgctc
ggcgccgaggccgccgcctcgcacaccgccgcgctggcaggcgacgacgcggtgtacgac
gcggtgttccgccagtacggcgtgctgcgcgcgcgcaacctcacggagttcttcgacctg
gcccacagcgcggccgtggcgggccgcccgcgcgaccgctcgatcggcctgttcacgctc
tcgggcggcgtcggcgcgctgatggccgacgaggcttcggcgcagggcctggacgtgcgg
ccgttgggcgaggccgcgcaggacacgctgcgcagttgggtgcccttcgcagcgccgcgc
aacccggtcgacatcaccgggcaggtcaccaacgacatgacgctgatcgagcgcacggcg
cgcgtgatgctggacgaccgcggcttcgcatcgtggatgggcttcctcgcggcagcgggc
gcgtcggacgcgttctggcccgtgctgcgctcgctcgtgacttcgctgcgcgaggcctac
cccgacacgctgctggcggtgagcacgctgctgtcgccggagcaccgtgccgagctcgag
gcgatgcgctgcctggtgttcgccgatccgtcggacggcatccgcacgatcgccgcgctg
gcggggctgaagcctgcagcggcggtggctgcggcccccgcatcgatggccccgtcgttg
acgctcgcgcccggcacgatgtccgagcccgacgcgctcgtactgctcgccgacgccggc
gtgcccgtggtcgcgcaccgcgtggtgcgcagcgccgacgaggccgcagccgcagccgag
gcgctcggcgatgcggtggtggtgaagatcgtcagcgccgacattccgcacaagtcggac
gtcggcggcgtggcgctcgggctgcgcggtgcggcgcaggcgcgcgcggccttcgaacgc
acacgcgaccacgcactcacggcccggcccgacgcgcggctcgacggcgcgctggtggcg
cgcatgctgacaggcggcgtcgagtgcatcgcgggcgtgcaccgcgacccggtgttcgga
ccggtgctgatgttcggcctgggcggcatccacgtcgagacgctgcgcgacgtgtcgctg
cgcgcattgccgatcacgcgcgacgacgcgctggcgatggtgcgcgaactgcgcgccttc
gcgatcctgaacggcgcacgcggcaggccgccggtcgacctcgattcgatcgccgatgcg
ctgtgcgcgctcgccgaccttgcgcagcgcgcgggcgactcgctcgacagcgccgagatc
aacccgctgatcgcacgcccgcaggccgagggcggctgcgtggcggtcgacgcgctcgtc
gtcggccgcgcgccctga
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