Variovorax paradoxus B4: VAPA_2c05770
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Entry
VAPA_2c05770 CDS
T02835
Name
(GenBank) putative xanthine dehydrogenase, FAD-binding subunit
KO
K11178
xanthine dehydrogenase YagS FAD-binding subunit [EC:
1.17.1.4
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00230
Purine metabolism
vpd01100
Metabolic pathways
vpd01120
Microbial metabolism in diverse environments
vpd01232
Nucleotide metabolism
Module
vpd_M00958
Adenine ribonucleotide degradation, AMP => Urate
vpd_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
VAPA_2c05770
Enzymes [BR:
vpd01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
VAPA_2c05770
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GFIT
Motif
Pfam:
FAD_binding_5
CO_deh_flav_C
Motif
Other DBs
NCBI-ProteinID:
AGU53136
UniProt:
T1XKT1
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All DBs
Position
2:587604..588554
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AA seq
316 aa
AA seq
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MKPFTYERAQSPAEAAAAVARSPGAKFIAGGTNLLDLMKLQIEAPTHLVDVNGLALDKIE
PTSEGGLRIGALVRNTDLAADERVRRDYGVLSRALLAGASGQLRNKATTAGNLLQRTRCP
YFYDTDQPCNKRQPGSGCSAIGGITRQHAVVGTSQACIATNPSDMAVAMRVLDATVETVR
PDGRSRVIPIADFHRLPGDTPHIETALERDELITGVTLPRPIGGTQIYRKVRDRASYAFA
LVSVAAIVQRDGSGRVALGGVAHKPWRLETAEAAMSQGAKAVTAQLLAGAQPTHENAFKL
PLAERALAAALLQARS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgtttacctacgagagggcgcagtccccggcagaggctgcggcggctgtcgcc
cgcagccccggtgccaagttcattgccggcggcaccaacctgctggacctgatgaagctg
cagatcgaagcgccgacgcacctggtcgacgtgaacggtcttgcgctggacaagatcgag
cccacgtccgaaggcggcttgcgcatcggcgcactggtgcgcaacaccgacctggctgcc
gacgagcgcgtgcgccgcgactacggcgtgctgtcccgcgcgctgctggccggcgcctct
ggccagttgcgcaacaaggccaccacggcgggcaacctgctgcagcgcacgcgctgcccc
tacttctacgacacggaccagccgtgcaacaagcgccagcccggcagcggctgcagcgcc
atcggtggcatcacacgccagcatgcggtggtcggcacgagccaggcctgcatcgcgacg
aacccgagcgacatggccgtggcgatgcgcgtgctcgacgcaacggtcgagacggtgcgc
cccgatggccgctcccgcgtgatcccgattgccgacttccatcgcctgcccggcgacacg
ccgcacatcgagacggcgctggagcgggacgaactgatcaccggcgtcacgctccccagg
cccatcggcggcacgcagatctaccgcaaggtccgcgaccgcgcctcctatgcctttgcg
ctcgtttccgtcgcggcgatcgtgcagcgcgatggctcgggccgcgtggcactgggcggc
gtggcccacaagccgtggcgcctggaaaccgcggaggccgcgatgtcgcagggcgccaag
gccgtgaccgcgcagctgctcgccggcgcacagccgacgcacgagaacgcattcaagttg
ccgttggccgagcgcgcgctggctgcggcgctgctgcaagcgaggagctga
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