Variovorax paradoxus B4: VAPA_2c05780
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Entry
VAPA_2c05780 CDS
T02835
Name
(GenBank) putative xanthine dehydrogenase, molybdenum-binding subunit
KO
K11177
xanthine dehydrogenase YagR molybdenum-binding subunit [EC:
1.17.1.4
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00230
Purine metabolism
vpd01100
Metabolic pathways
vpd01120
Microbial metabolism in diverse environments
vpd01232
Nucleotide metabolism
Module
vpd_M00958
Adenine ribonucleotide degradation, AMP => Urate
vpd_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
VAPA_2c05780
Enzymes [BR:
vpd01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
VAPA_2c05780
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MoCoBD_1
MoCoBD_2
Ald_Xan_dh_C
Motif
Other DBs
NCBI-ProteinID:
AGU53137
UniProt:
T1XJV2
LinkDB
All DBs
Position
2:588557..590767
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AA seq
736 aa
AA seq
DB search
MKFDTPATTNPIDQLKIIGKPTARIDGPMKTTGTARYAYERHTEVPNAAYGWVVGAAIAK
GRIASMDLGAARAAPGVLAIVTARNAGKLGKGDFNTAKLLGGPEIDHYHQAVALVVATTF
EQARAAAQLVRIGYTRGPGRFDLAAEKEAAQMPKPSPFSGEPQTKTGDFPGAFAAAAVQL
DATYTTPDESHAMMEPHASIAQWKGDKLTVWTSNQMIAWGVGDVAKMLGIPKENVRLVSP
FIGGGFGGKLFVRADAVLAALGARAAKRPVKVALQRPLMVNNTTHRPATIQRIRIGAARD
GKITAIAHEGWSGDLPDGQPETAVNQTRLLYAGANRLTTTRLAVLDLPEGNAMRAPGEAP
GMMALEIAMDEMAEKLALDPVEFRVRNDTQVDPEQPQRPYSQRKLIECLRTGAERFGWSK
RNAAPGQQREGRWLVGMGVAAAFRNNLLTKSAARVRLDNRGMVTVETDMTDIGTGSYTII
AQTAAETMGVPLDRVLVRLGDSAYPESAGSGGQWGANNSTSGVYAACMKLREAVASKLGF
GAVDVEFADGMVRAGERAVPLAEAAGANGLVAEDGIEYGDLDKKYQQSTFGAHFVEVGVD
AATGEIRVRRMLAVCAAGRILNPTSARSQVIGAMTMGVGGALMEELALDKRHGFFVNHDL
AGYEVPVHADIPHQDVIFLDETDPISSPMKAKGVGELGMCGVAAAVANAVYNATGVRVRN
YPITLDKLLDRLPPVV
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcgacacgcctgccacgaccaatcccatcgaccagctcaagatcatcggcaag
ccgacggcccggatcgacggcccgatgaagaccaccggcaccgcacgctacgcctatgaa
cgccacaccgaggtgcccaacgccgcctacggctgggtggtgggcgccgccatcgcgaaa
ggccgcatcgcctcgatggacctgggcgccgcgcgcgcggcgccgggcgtgctggccatc
gtcacggcgcgcaatgccggcaagctgggcaagggtgacttcaatacggccaagctcctg
ggcgggcccgagatcgatcactaccaccaggccgtggcgctcgtcgtcgccaccaccttc
gagcaggcgcgcgcggcggcacagctggtgcgtatcgggtacacgcgggggccggggcgc
ttcgacctggccgcggaaaaggaggcggcacagatgcccaagcccagtccgttttctggc
gagccgcaaacgaagacgggcgatttccccggcgcgttcgccgcggccgccgtgcagctc
gatgcaacctacaccacgcccgacgagtcgcacgccatgatggagccgcacgcctccatt
gcgcagtggaagggcgacaagctcactgtctggacatcgaaccagatgattgcctggggc
gtcggcgatgtcgccaagatgctcggcatcccgaaggagaacgtgcgcctggtctcgcct
ttcatcggcggcggctttggcggcaagctgttcgtgcgcgcggatgcggtgcttgccgcg
ctgggcgcgcgggcggcaaaacggcccgtgaaggtggccttgcagcggcccttgatggtg
aacaacaccacgcatcggccggcgaccatccagcgcatccgcatcggcgccgcgagggac
ggcaagatcaccgccattgcccacgaaggctggtccggcgacctgccggacggacagccg
gaaaccgcggtcaaccagacccggctgctgtacgccggtgccaaccgcctgacgaccacg
cgactggccgtgctggacctgcccgagggcaacgccatgcgcgcgcccggcgaggcgccg
ggcatgatggcgctggagatcgcgatggacgagatggcggagaaactcgcactcgacccg
gtcgagtttcgcgtgcggaacgacacgcaggtcgatccggagcagccgcagcgcccgtat
tcccagcgcaagctgatcgaatgcctgcgcacgggcgccgagcgcttcggctggagcaag
cgcaacgcggcacccggacagcagcgcgagggacgctggctcgtgggaatgggcgttgcc
gcggcattccgcaacaacctcttgaccaagtcggccgcgcgcgtgcgcctggacaatcgg
ggcatggtcacggtcgaaaccgacatgaccgacatcggcacgggctcgtacaccatcatc
gcgcagaccgccgccgagacgatgggcgtgccgctcgacagagtgctcgtgcgcctgggc
gactcggcctatcccgagtcggccggctcgggcgggcagtggggcgccaacaactcgacc
tcgggcgtctatgcggcgtgcatgaagctgcgcgaagccgtggcaagcaagctgggcttc
ggcgcggtcgacgtggaattcgcggatggcatggtgcgcgccggcgagcgtgcggtgccg
ctcgccgaagcagcgggcgcgaacggcctcgtggccgaggacggcatcgagtacggcgac
ctcgacaagaagtaccagcagtccaccttcggtgcgcatttcgtggaggtcggcgtcgat
gccgccaccggcgagatccgcgttcggcgcatgctcgcggtttgtgccgccgggcgcatc
ctgaatcccacctccgcccgcagccaggtgatcggcgccatgacgatgggcgtcggaggg
gcgctgatggaggagttggcgctcgacaagcggcatggcttcttcgtcaaccacgacctc
gcgggctacgaggtgccggtgcacgccgacatcccccatcaggacgtgatcttcctggac
gagacggatccgatctcttcgccgatgaaggccaagggggtcggggagctcggcatgtgc
ggcgtcgcagccgcggtggccaacgccgtctacaacgccacgggcgttcgggtgcgcaac
tatccgatcacgctcgacaagctgctggatcggttgccgccggtggtgtga
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