Variovorax paradoxus B4: VAPA_2c06000
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Entry
VAPA_2c06000 CDS
T02835
Name
(GenBank) putative 2-oxoacid:acceptor oxidoreductase, alpha subunit
KO
K00174
2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:
1.2.7.3
1.2.7.11
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00010
Glycolysis / Gluconeogenesis
vpd00020
Citrate cycle (TCA cycle)
vpd00620
Pyruvate metabolism
vpd00650
Butanoate metabolism
vpd01100
Metabolic pathways
vpd01110
Biosynthesis of secondary metabolites
vpd01120
Microbial metabolism in diverse environments
vpd01200
Carbon metabolism
vpd01210
2-Oxocarboxylic acid metabolism
Module
vpd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vpd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
VAPA_2c06000
00020 Citrate cycle (TCA cycle)
VAPA_2c06000
00620 Pyruvate metabolism
VAPA_2c06000
00650 Butanoate metabolism
VAPA_2c06000
Enzymes [BR:
vpd01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.3 2-oxoglutarate synthase
VAPA_2c06000
1.2.7.11 2-oxoacid oxidoreductase (ferredoxin)
VAPA_2c06000
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
AGU53159
UniProt:
T1XLJ9
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All DBs
Position
2:613673..615532
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AA seq
619 aa
AA seq
DB search
MTSAGAIPQIEAVNDFVIKFANVNGSGSASANELFAKAILRMGVPVSPRNIFPSNIQGLP
TWYEVRVTEEGHLGRRGGTDMMVAMNPQTWDADLAELEPGGYLFYDSTRPLPPSKFRSDV
RVIGMPLTEICNAVYQDPRQRQLFKNIVYVGALAILLGIEPEVVEKLFGEQYKGKEKLLA
SNVQALHLGCDFARENLEPLGLRVQRADRVGHRIFVDGNSAAALGCVYGGATVAAWYPIT
PSSSVAEAFQKYCTKFRVDPATGQQRFAIVQAEDELASIGVVVGAGWNGARAFTATSGPG
ISLMTEFIGLAYFAEIPVTIINVQRGGPSTGMPTRTQQADILSCAYASHGDTKHVLLFPE
DPHECFEHAAAALDLADRLQTPVFLMTDLDIGMNQRLCAPFAWDDSKAYDRGKVMSAEEL
EAGRDFGRYKDVDGDGIPWRTLPGTHPTKGSYFTRGTTRDAYARYSERGPDYIYNMERLL
KKFATAATLVPQPVLRPAAEKTELGVIYFGSTSPAMHEALQALEARGIHLDALRLRAFPF
PDSVVQFLAQHSQVFVVEQNRDAQMRNLLVNELDIDPARLVRVLHFDGTPITARFIVQAI
GTHVEKTQASGAAGTKESA
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
gtgacaagcgcgggggccatcccgcagatcgaagcggtcaacgatttcgtcatcaagttc
gccaacgtcaacggctcgggttcggcctccgccaacgagctgttcgccaaggccatcctg
cgcatgggcgtgccggtgagtccgcgcaacatctttcccagcaatatccagggcctgccg
acctggtacgaggtgcgcgtgaccgaagagggccacctggggcggcgcggcggcaccgac
atgatggtggcgatgaacccgcagacctgggacgccgacctggccgagctggagcccggc
ggctatctcttctacgacagcacgcggccgctgccgccgtcgaagttccgcagcgacgtc
cgcgtgatcggcatgccgctgaccgaaatctgcaacgccgtctatcaggacccgcgccag
cgccagctgttcaagaacatcgtctatgtgggggcgctggccatcctgctgggcatcgag
ccggaagtggtcgagaagctgttcggcgagcagtacaagggcaaggaaaagctgctggcc
tccaacgtgcaggcgctgcacctgggctgcgacttcgcgcgggagaacctcgagcccctg
gggctgcgggttcagcgcgccgatcgtgtgggccatcgcatcttcgtggacggcaacagc
gccgcggcgctgggctgcgtgtatggcggcgccacggtcgcggcctggtatccgatcacg
ccgtcgtcctcggtggccgaggccttccagaagtactgcaccaaattccgcgtggacccg
gccaccggccagcagcgctttgccatcgtgcaggcggaagacgagctcgcctcgatcggc
gtggtggtcggcgccggctggaacggcgcacgggccttcacggcgacctcgggaccgggc
atttcgctgatgaccgagttcatcggcctggcctactttgccgagatcccggtcacgatc
atcaacgtgcagcgcggtggcccttccaccggcatgccgacgcgcacgcagcaggccgac
atcctgtcctgcgcctacgcctcgcacggcgacaccaagcacgtgctgctgtttcccgag
gacccgcacgagtgcttcgagcacgcggcggcggcgctggacctggccgaccggctgcag
acgccggtgttcctgatgacggacctggacatcggcatgaaccagcgcctgtgcgcgccc
ttcgcctgggacgacagcaaggcctacgaccgcggcaaggttatgagcgccgaagagctc
gaggccggccgcgacttcggccgctacaaggacgtggacggcgacggcattccctggcgc
acgctgccgggcacgcacccgaccaagggcagctacttcacccgcggcacgacgcgcgac
gcctacgcccggtattcggagcgcgggccggactacatctacaacatggagcggctgctg
aagaagttcgcgaccgcggccacgttggtgccgcagccggtgctgcgtccggccgccgag
aagaccgagttgggcgtgatctatttcggttcgaccagcccggccatgcacgaggcgctg
caggcactggaagcacgcggcatccacctcgatgcgctgcggctgcgcgcctttcccttc
ccggacagcgtggtgcagttcctggcgcagcacagtcaggtgttcgtggtcgagcagaat
cgcgacgcccagatgcgcaacctgctggtcaacgagctggacatcgatcccgcccggctg
gtgcgggtgctgcatttcgacggcacgcccatcacggcgcgcttcatcgtccaggccatc
ggcacgcatgtggagaagacgcaagcctccggcgccgccggcacgaaggaatctgcatga
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